Posttranslational regulation impacts the fate of duplicated genes (Q33734025)

29 July 2017

Posttranslational regulation impacts the fate of duplicated genes (English)

1 reference

29 July 2017

3

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29 July 2017

6

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29 July 2017

1

Grigoris D Amoutzias

1 reference

29 July 2017

Ying He

2

1 reference

PubMed ID

20080574

29 July 2017

Dimitris Mossialos

series ordinal

4

1 reference

PubMed ID

20080574

29 July 2017

Stephen G Oliver

series ordinal

5

1 reference

29 July 2017

22 December 2009

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Proceedings of the National Academy of Sciences of the United States of America

29 July 2017

1 reference

29 July 2017

107

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29 July 2017

7

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29 July 2017

2967-2971

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Global analysis of Cdk1 substrate phosphorylation sites provides insights into evolution

29 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

Exploiting gene deletion fitness effects in yeast to understand the modular architecture of protein complexes under different growth conditions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

Plants with double genomes might have had a better chance to survive the Cretaceous-Tertiary extinction event

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

PhosphoPep--a database of protein phosphorylation sites in model organisms

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

Tight regulation of unstructured proteins: from transcript synthesis to protein degradation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

Why do hubs in the yeast protein interaction network tend to be essential: reexamining the connection between the network topology and essentiality

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

A multidimensional chromatography technology for in-depth phosphoproteome analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

PHOSIDA (phosphorylation site database): management, structural and evolutionary investigation, and prediction of phosphosites

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

The evolutionary consequences of polyploidy

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

Profiling phosphoproteins of yeast mitochondria reveals a role of phosphorylation in assembly of the ATP synthase

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

Comparative analysis indicates regulatory neofunctionalization of yeast duplicates

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

The gene balance hypothesis: from classical genetics to modern genomics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

Analysis of phosphorylation sites on proteins from Saccharomyces cerevisiae by electron transfer dissociation (ETD) mass spectrometry

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

Functional analysis of gene duplications in Saccharomyces cerevisiae

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

Stratus not altocumulus: a new view of the yeast protein interaction network

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

Gene-balanced duplications, like tetraploidy, provide predictable drive to increase morphological complexity

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

Multiple rounds of speciation associated with reciprocal gene loss in polyploid yeasts

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

Nonrandom divergence of gene expression following gene and genome duplications in the flowering plant Arabidopsis thaliana

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

Expression divergence between duplicate genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

Structure, function, and evolution of transient and obligate protein-protein interactions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

Modeling gene and genome duplications in eukaryotes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

Rapid subfunctionalization accompanied by prolonged and substantial neofunctionalization in duplicate gene evolution

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

Genome evolution in yeasts

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

The Ashbya gossypii Genome as a Tool for Mapping the Ancient Saccharomyces cerevisiae Genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

The importance of intrinsic disorder for protein phosphorylation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

Global analysis of protein expression in yeast

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

Dosage sensitivity and the evolution of gene families in yeast

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

Functional profiling of the Saccharomyces cerevisiae genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

Systematic screen for human disease genes in yeast

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

The evolutionary fate and consequences of duplicate genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

T-Coffee: A novel method for fast and accurate multiple sequence alignment

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

Gene ontology: tool for the unification of biology

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

The probability of duplicate gene preservation by subfunctionalization

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

Molecular evidence for an ancient duplication of the entire yeast genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2840353

Do disparate mechanisms of duplication add similar genes to the genome?

21 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0911603107

Quantitative phosphoproteomics applied to the yeast pheromone signaling pathway

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0911603107

Large-scale phosphorylation analysis of alpha-factor-arrested Saccharomyces cerevisiae.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0911603107

Functional evolution of the yeast protein interaction network

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0911603107

Weak functional constraints on phosphoproteomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0911603107

All duplicates are not equal: the difference between small-scale and genome duplication

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0911603107

Reproducible isolation of distinct, overlapping segments of the phosphoproteome

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0911603107

NetPhosYeast: prediction of protein phosphorylation sites in yeast.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0911603107

Phosphoproteome Analysis of Fission Yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0911603107

Non-functional phosphorylations?

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20080574

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

An Exponential Core in the Heart of the Yeast Protein Interaction Network

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20080574

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Gene complexity and gene duplicability

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20080574

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0911603107

1 reference

29 July 2017

0 references

1 reference

29 July 2017

1 reference

PubMed ID

20080574