Closing in on the C. elegans ORFeome by cloning TWINSCAN predictions (Q33736275)

29 July 2017

Closing in on the C. elegans ORFeome by cloning TWINSCAN predictions (English)

1 reference

29 July 2017

Caenorhabditis elegans

0 references

author

Manimozhiyan Arumugam

3

1 reference

29 July 2017

Chaochun Wei

1

0 references

Marc Vidal

6

object named as

Marc Vidal

1 reference

29 July 2017

Philippe Lamesch

2

1 reference

29 July 2017

Jennifer Rosenberg

4

1 reference

29 July 2017

Ping Hu

5

1 reference

29 July 2017

Michael R Brent

7

1 reference

29 July 2017

1 April 2005

1 reference

29 July 2017

1 reference

29 July 2017

15

1 reference

29 July 2017

4

1 reference

29 July 2017

577-582

1 reference

Gene prediction and verification in a compact genome with numerous small introns

29 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1074372

A phylogeny of caenorhabditis reveals frequent loss of introns during nematode evolution

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1074372

Recent advances in gene structure prediction

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1074372

Identification of rat genes by TWINSCAN gene prediction, RT-PCR, and direct sequencing

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1074372

WormBase: a multi-species resource for nematode biology and genomics

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1074372

The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1074372

Eval: a software package for analysis of genome annotations

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1074372

Gene prediction with a hidden Markov model and a new intron submodel

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1074372

Comparison of mouse and human genomes followed by experimental verification yields an estimated 1,019 additional genes

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1074372

Leveraging the mouse genome for gene prediction in human: from whole-genome shotgun reads to a global synteny map.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1074372

GAZE: a generic framework for the integration of gene-prediction data by dynamic programming

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1074372

Integrating genomic homology into gene structure prediction.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1074372

WormBase: network access to the genome and biology of Caenorhabditis elegans

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1074372

DNA cloning using in vitro site-specific recombination

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1074372

Ab initio gene finding in Drosophila genomic DNA

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1074372

Protein interaction mapping in C. elegans using proteins involved in vulval development

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1074372

Genome sequence of the nematode C. elegans: a platform for investigating biology

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1074372

Prediction of complete gene structures in human genomic DNA

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1074372

Analysis of compositionally biased regions in sequence databases

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1074372

C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1074372

GATEWAY recombinational cloning: application to the cloning of large numbers of open reading frames or ORFeomes.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1074372

30 October 2018

Identifiers

DOI

10.1101/GR.3329005

1 reference

release_hvqc2eqde5gg3mgza56ewgmki4

29 July 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/hvqc2eqde5gg3mgza56ewgmki4

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMCID

1074372

1 reference

29 July 2017

1 reference