Exploring the use of cytochrome oxidase c subunit 1 (COI) for DNA barcoding of free-living marine nematodes (Q33742034)

29 July 2017

Exploring the use of cytochrome oxidase c subunit 1 (COI) for DNA barcoding of free-living marine nematodes (English)

1 reference

29 July 2017

1 reference

4

Thierry Backeljau

1 reference

29 July 2017

2

Jan Vanaverbeke

1 reference

29 July 2017

Sofie Derycke

1

1 reference

29 July 2017

Annelien Rigaux

series ordinal

3

1 reference

29 July 2017

Tom Moens

series ordinal

5

1 reference

29 July 2017

language of work or name

English

0 references

publication date

28 October 2010

1 reference

29 July 2017

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29 July 2017

5

1 reference

29 July 2017

10

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29 July 2017

e13716

1 reference

Creative Commons Attribution 4.0 International

29 July 2017

start time

28 October 2010

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Progress towards DNA barcoding of fungi

1 reference

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Species identification of North American guinea worms (Nematoda: Dracunculus) with DNA barcoding

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2965665

Ultrasequencing of the meiofaunal biosphere: practice, pitfalls and promises.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2965665

A unique genetic code change in the mitochondrial genome of the parasitic nematode Radopholus similis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2965665

A DNA barcode for land plants

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2965665

Absence of wolbachia in nonfilariid nematodes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2965665

Integrated taxonomy: traditional approach and DNA barcoding for the identification of filarioid worms and related parasites (Nematoda)

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2965665

Many species in one: DNA barcoding overestimates the number of species when nuclear mitochondrial pseudogenes are coamplified

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2965665

MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2965665

DNA barcoding cannot reliably identify species of the blowfly genus Protocalliphora (Diptera: Calliphoridae)

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2965665

Prospects for fungus identification using CO1 DNA barcodes, with Penicillium as a test case.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2965665

An integrated approach to fast and informative morphological vouchering of nematodes for applications in molecular barcoding

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2965665

Within-trophic group interactions of bacterivorous nematode species and their effects on the bacterial community and nitrogen mineralization.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2965665

MUSCLE: multiple sequence alignment with high accuracy and high throughput

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2965665

NUMTs in sequenced eukaryotic genomes.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2965665

Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2965665

Biological identifications through DNA barcodes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2965665

Mitochondrial pseudogenes: evolution's misplaced witnesses

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2965665

SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2965665

DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2965665

18S ribosomal RNA gene phylogeny for some Rhabditidae related to Caenorhabditis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2965665

Genetic variants within the genus Echinococcus identified by mitochondrial DNA sequencing.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2965665

Top-down impact of bacterivorous nematodes on the bacterial community structure: a microcosm study.

21 June 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0013716

Evaluating high-throughput sequencing as a method for metagenomic analysis of nematode diversity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0013716

An improved molecular phylogeny of the Nematoda with special emphasis on marine taxa

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0013716

Slow mitochondrial COI sequence evolution at the base of the metazoan tree and its implications for DNA barcoding.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0013716

Phylogeography of the Rhabditis (Pellioditis) marina species complex: evidence for long-distance dispersal, and for range expansions and restricted gene flow in the northeast Atlantic.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0013716

Single-strand conformation polymorphism-based analysis of mitochondrial cytochrome c oxidase subunit 1 reveals significant substructuring in hookworm populations

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0013716

A phylogenetic analysis of filarial nematodes: comparison with the phylogeny of Wolbachia endosymbionts

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0013716

The use of mean instead of smallest interspecific distances exaggerates the size of the "barcoding gap" and leads to misidentification

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0013716

Nuclear integrations: challenges for mitochondrial DNA markers

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0013716

Development and evaluation of a DNA-barcoding approach for the rapid identification of nematodes

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0013716

Detection of fungal 18S rRNA sequences in conjunction with marine nematode 18S rRNA amplicons

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0013716

Molecular prospecting for cryptic species of nematodes: mitochondrial DNA versus internal transcribed spacer

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21060838

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Molecular barcodes for soil nematode identification

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21060838

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0013716

1 reference

29 July 2017

0 references

1 reference

29 July 2017

1 reference