Ion selectivity of alpha-hemolysin with beta-cyclodextrin adapter. II. Multi-ion effects studied with grand canonical Monte Carlo/Brownian dynamics simulations. (Q33746942)

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English	Ion selectivity of alpha-hemolysin with beta-cyclodextrin adapter. II. Multi-ion effects studied with grand canonical Monte Carlo/Brownian dynamics simulations.	scientific article

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18 January 2020

Ion selectivity of alpha-hemolysin with beta-cyclodextrin adapter. II. Multi-ion effects studied with grand canonical Monte Carlo/Brownian dynamics simulations (English)

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18 January 2020

Monte Carlo method

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D. Eric Walters

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18 January 2020

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Bernhard Egwolf

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18 January 2020

Yun Luo

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18 January 2020

Benoît Roux

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18 January 2020

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1 March 2010

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18 January 2020

Journal of Physical Chemistry B

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18 January 2020

114

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18 January 2020

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18 January 2020

2901-2909

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18 January 2020

All-atom empirical potential for molecular modeling and dynamics studies of proteins

1 reference

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CHARMM: the biomolecular simulation program

1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2843906

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1 reference

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1 reference

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21 June 2018

Prolonged residence time of a noncovalent molecular adapter, beta-cyclodextrin, within the lumen of mutant alpha-hemolysin pores

1 reference

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21 June 2018

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1 reference

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1 reference

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Sequence-specific detection of individual DNA strands using engineered nanopores.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2843906

21 June 2018

Interaction of the noncovalent molecular adapter, beta-cyclodextrin, with the staphylococcal alpha-hemolysin pore.

1 reference

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1 reference

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2843906

21 June 2018

alpha-Hemolysin from Staphylococcus aureus: an archetype of beta-barrel, channel-forming toxins

1 reference

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1 reference

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Structure of staphylococcal alpha-hemolysin, a heptameric transmembrane pore

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2843906

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Areas, volumes, packing and protein structure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2843906

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Protein nanopores with covalently attached molecular adapters.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2843906

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1 reference

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10.1021/JP906791B

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18 January 2020

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18 January 2020

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