Efficient computation of optimal oligo-RNA binding (Q33754244)

29 July 2017

title

Efficient computation of optimal oligo-RNA binding (English)

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29 July 2017

1

Nathan O Hodas

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29 July 2017

Daniel P Aalberts

2

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29 July 2017

language of work or name

English

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publication date

17 December 2004

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29 July 2017

published in

Nucleic Acids Research

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29 July 2017

volume

32

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29 July 2017

issue

22

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29 July 2017

page(s)

6636-6642

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Prediction of mammalian microRNA targets

29 July 2017

cites work

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Predicting oligonucleotide affinity to nucleic acid targets

21 June 2018

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Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure

21 June 2018

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21 June 2018

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A dynamic programming algorithm for RNA structure prediction including pseudoknots

21 June 2018

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Thermodynamic parameters for an expanded nearest-neighbor model for formation of RNA duplexes with Watson-Crick base pairs

21 June 2018

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Thermodynamics of internal C.T mismatches in DNA.

21 June 2018

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Identification of common molecular subsequences

21 June 2018

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Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information

21 June 2018

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The equilibrium partition function and base pair binding probabilities for RNA secondary structure

21 June 2018

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Thermodynamic modeling of donor splice site recognition in pre-mRNA.

21 June 2018

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Retrotransposition of the Ll.LtrB group II intron proceeds predominantly via reverse splicing into DNA targets.

30 October 2018

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Calculating nucleic acid secondary structure

30 October 2018

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Fast evaluation of internal loops in RNA secondary structure prediction.

30 October 2018

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An improved algorithm for matching biological sequences.

30 October 2018

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Factors affecting the thermodynamic stability of small asymmetric internal loops in RNA

30 October 2018

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12 December 2020

Predicting thermodynamic properties of RNA

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12 December 2020

Improved nearest-neighbor parameters for predicting DNA duplex stability

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12 December 2020

Thermodynamics and NMR of internal G.T mismatches in DNA

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12 December 2020

Nearest neighbor thermodynamic parameters for internal G.A mismatches in DNA

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12 December 2020

Nearest-neighbor thermodynamics and NMR of DNA sequences with internal A.A, C.C, G.G, and T.T mismatches

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12 December 2020

Nearest-neighbor thermodynamics of internal A.C mismatches in DNA: sequence dependence and pH effects

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12 December 2020

Identifiers

DOI

10.1093/NAR/GKH1008

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29 July 2017

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29 July 2017

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