The generalized transducing Salmonella bacteriophage ES18: complete genome sequence and DNA packaging strategy (Q33758566)

29 July 2017

title

The generalized transducing Salmonella bacteriophage ES18: complete genome sequence and DNA packaging strategy (English)

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29 July 2017

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whole genome sequencing

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9

Graham F Hatfull

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29 July 2017

Sherwood R Casjens

1

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29 July 2017

Eddie B Gilcrease

2

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29 July 2017

Danella A Winn-Stapley

3

1 reference

29 July 2017

Petra Schicklmaier

4

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29 July 2017

Horst Schmieger

5

1 reference

29 July 2017

Marisa L Pedulla

6

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29 July 2017

Michael E Ford

7

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29 July 2017

Jennifer M Houtz

8

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29 July 2017

Roger W Hendrix

10

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29 July 2017

language of work or name

English

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publication date

1 February 2005

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29 July 2017

published in

Journal of Bacteriology

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29 July 2017

volume

187

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29 July 2017

issue

3

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29 July 2017

page(s)

1091-1104

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Conserved translational frameshift in dsDNA bacteriophage tail assembly genes.

29 July 2017

cites work

1 reference

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14 July 2018

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14 July 2018

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The refined structure of a protein catenane: the HK97 bacteriophage capsid at 3.44 A resolution

14 July 2018

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The crystal structure of the bifunctional primase-helicase of bacteriophage T7

14 July 2018

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A new phage-typing scheme for Salmonella typhi-murium

14 July 2018

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In vivo reconstitution of the FhuA transport protein of Escherichia coli K-12.

14 July 2018

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Point mutations in exon I of the herpes simplex virus putative terminase subunit, UL15, indicate that the most conserved residues are essential for cleavage and packaging

14 July 2018

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Sequence analysis of the genome of the temperate Yersinia enterocolitica phage PY54.

14 July 2018

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Prophages and bacterial genomics: what have we learned so far?

14 July 2018

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Genomic Structure of the Salmonella enterica Serovar Typhimurium DT 64 Bacteriophage ST64T: Evidence for Modular Genetic Architecture

14 July 2018

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Origins of highly mosaic mycobacteriophage genomes

14 July 2018

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Corrected sequence of the bacteriophage p22 genome.

14 July 2018

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Phenotypes of lexA mutations in Salmonella enterica: evidence for a lethal lexA null phenotype due to the Fels-2 prophage

14 July 2018

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Sequence analysis of bacteriophage T4 DNA packaging/terminase genes 16 and 17 reveals a common ATPase center in the large subunit of viral terminases

14 July 2018

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The nucleotide sequence of Shiga toxin (Stx) 2e-encoding phage phiP27 is not related to other Stx phage genomes, but the modular genetic structure is conserved.

14 July 2018

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Complete genomic sequence of SfV, a serotype-converting temperate bacteriophage of Shigella flexneri

14 July 2018

1 reference

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The genome sequence of the facultative intracellular pathogen Brucella melitensis

14 July 2018

1 reference

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Genome Sequence of the Plant Pathogen and Biotechnology Agent Agrobacterium tumefaciens C58

14 July 2018

1 reference

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The genome of the natural genetic engineer Agrobacterium tumefaciens C58

14 July 2018

1 reference

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Complete genome sequence of Salmonella enterica serovar Typhimurium LT2

14 July 2018

1 reference

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Nucleotide sequence of coliphage HK620 and the evolution of lambdoid phages

14 July 2018

1 reference

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The gene transfer agent of Rhodobacter capsulatus and "constitutive transduction" in prokaryotes.

14 July 2018

1 reference

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FhuA barrel-cork hybrids are active transporters and receptors

14 July 2018

1 reference

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Complete genome sequence of Caulobacter crescentus

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545730

The origins and ongoing evolution of viruses

14 July 2018

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Topologically linked protein rings in the bacteriophage HK97 capsid

14 July 2018

1 reference

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Genomic sequences of bacteriophages HK97 and HK022: pervasive genetic mosaicism in the lambdoid bacteriophages

14 July 2018

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Complete nucleotide sequence, molecular analysis and genome structure of bacteriophage A118 of Listeria monocytogenes: implications for phage evolution

14 July 2018

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Genetic analysis of a bacterial genetic exchange element: the gene transfer agent of Rhodobacter capsulatus

14 July 2018

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The C-terminal portion of the tail fiber protein of bacteriophage lambda is responsible for binding to LamB, its receptor at the surface of Escherichia coli K-12.

14 July 2018

1 reference

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Genome Sequence of the Radioresistant Bacterium Deinococcus radiodurans R1

14 July 2018

1 reference

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Isolation and characterization of APSE-1, a bacteriophage infecting the secondary endosymbiont of Acyrthosiphon pisum.

14 July 2018

1 reference

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Isolation of a temperate bacteriophage encoding the type III effector protein SopE from an epidemic Salmonella typhimurium strain

14 July 2018

1 reference

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Sequence of Shiga toxin 2 phage 933W from Escherichia coli O157:H7: Shiga toxin as a phage late-gene product

14 July 2018

1 reference

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Evolutionary relationships among diverse bacteriophages and prophages: all the world's a phage

14 July 2018

1 reference

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Molecular survey of the Salmonella phage typing system of Anderson.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545730

Multiple sequence alignment with Clustal X

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545730

Consed: a graphical tool for sequence finishing

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545730

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545730

Two groups of bacteriophages infecting Streptococcus thermophilus can be distinguished on the basis of mode of packaging and genetic determinants for major structural proteins

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545730

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545730

Sequential headful packaging and fate of the cleaved DNA ends in bacteriophage SPP1.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545730

Proteins responsible for lysogenic conversion caused by coliphages N15 and phi80 are highly homologous

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545730

Virus DNA packaging: the strategy used by phage lambda

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545730

A programmed translational frameshift is required for the synthesis of a bacteriophage lambda tail assembly protein.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545730

Linear chromosomal physical and genetic map of Borrelia burgdorferi, the Lyme disease agent.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545730

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545730

Identification of related genes in phages phi 80 and P22 whose products are inhibitory for phage growth in Escherichia coli IHF mutants

14 July 2018

1 reference

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Analysis of the open reading frames of the main capsid proteins of actinophage VWB.

14 July 2018

1 reference

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Structure and restriction enzyme maps of the circularly permuted DNA of staphylococcal bacteriophage phi 11.

14 July 2018

1 reference

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Solid-phase sequence analysis of polypeptides eluted from polyacrylamide gels. An aid to interpretation of DNA sequences exemplified by the Escherichia coli unc operon and bacteriophage lambda.

14 July 2018

1 reference

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ES18, a general transducing phage for smooth and nonsmooth Salmonela typhimurium

14 July 2018

1 reference

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Packaging of an oversize transducing genome by Salmonella phage P22.

14 July 2018

1 reference

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Non-random circular permutation of phage P22 DNA.

14 July 2018

1 reference

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Protein Fusion: A Novel Reaction in Bacteriophage λ Head Assembly

14 July 2018

1 reference

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Plasmid transduction by Bacillus subtilis bacteriophage SPP1: effects of DNA homology between plasmid and bacteriophage

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545730

The current status and portability of our sequence handling software

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545730

Recognition and cleavage of the bacteriophage P1 packaging site (pac). I. Differential processing of the cleaved ends in vivo.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545730

Analysis in vivo of the bacteriophage P22 headful nuclease

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545730

Sequence determinants of cytosolic N-terminal protein processing

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545730

Initiation of bacteriophage P22 DNA packaging series. Analysis of a mutant that alters the DNA target specificity of the packaging apparatus

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545730

Nucleotide sequence of the bacteriophage P22 gene 19 to 3 region: identification of a new gene required for lysis.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545730

Genetic population structure, clonal phylogeny, and pathogenicity of Salmonella paratyphi B.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545730

Nucleotide sequence of the bacteriophage P22 genes required for DNA packaging

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545730

Detection of specific sequences among DNA fragments separated by gel electrophoresis

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545730

Sensitivity to bacteriophage ES18 of strains of "S. dublin", "S. enteritidis" and "S. blegdam" and related serotypes (author's transl)

14 July 2018

1 reference

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Assembly of bacteriophage lambda heads: protein processing and its genetic control in petit lambda assembly

14 July 2018

1 reference

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Physical mapping of BglII, BamHI, EcoRI, HindIII and PstI restriction fragments of bacteriophage P1 DNA

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545730

A Generalized Transducing Salmonella Phage ES18 Can Recombine with a Serologically Unrelated Phage Fels 1

14 July 2018

1 reference

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Molecular genetics of bacteriophage P22

14 July 2018

1 reference

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EcoRI analysis of bacteriophage P22 DNA packaging

14 July 2018

1 reference

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The chromosome of Shigella flexneri bacteriophage Sf6: complete nucleotide sequence, genetic mosaicism, and DNA packaging.

14 July 2018

1 reference

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The genome and proteome of coliphage T1.

30 October 2018

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The Pasteurella multocida toxin is encoded within a lysogenic bacteriophage.

30 October 2018

1 reference

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The genome sequence of the entomopathogenic bacterium Photorhabdus luminescens

30 October 2018

1 reference

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Specific targeting of a DNA-binding protein to the SPP1 procapsid by interaction with the portal oligomer.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545730

Coat protein fold and maturation transition of bacteriophage P22 seen at subnanometer resolutions

30 October 2018

1 reference

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The DNA site utilized by bacteriophage P22 for initiation of DNA packaging.

30 October 2018

1 reference

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Bacteriophage Mu genome sequence: analysis and comparison with Mu-like prophages in Haemophilus, Neisseria and Deinococcus.

30 October 2018

1 reference

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Unsuspected prophage-like elements in Salmonella typhimurium

30 October 2018

1 reference

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Protein chainmail: catenated protein in viral capsids

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545730

Sequence comparison of the genes for immunity, DNA replication, and cell lysis of the P22-related Salmonella phages ES18 and L.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545730

Genomic sequence and analysis of the atypical temperate bacteriophage N15 1 1Edited by M. Gottesman

30 October 2018

1 reference

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Molecular genetic analysis of bacteriophage P22 gene 3 product, a protein involved in the initiation of headful DNA packaging

30 October 2018

1 reference

12 December 2020

DNA analysis of temperate bacteriophage Aa(phi)23 isolated from actinobacillus actinomycetemcomitans

1 reference

12 December 2020

Protein fusion during the assembly of phage lambda heads

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12 December 2020

Characterization of bacteriophage φ42 DNA

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12 December 2020

Recognition and cleavage of the bacteriophage P1 packaging site (pac). II. Functional limits of pac and location of pac cleavage termini

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12 December 2020

DNA Strider. A Macintosh program for handling protein and nucleic acid sequences

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12 December 2020

The small subunit of the terminase enzyme of Bacillus subtilis bacteriophage SPP1 forms a specialized nucleoprotein complex with the packaging initiation region

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12 December 2020

DNA requirements in vivo for phage T4 packaging

1 reference

12 December 2020

10.1128/JB.187.3.1091-1104.2005

Identifiers

DOI

1 reference

29 July 2017

1 reference

29 July 2017

1 reference