Structure of HIV-1 quasi-species as early indicator for switches of co-receptor tropism. (Q33759112)

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17 January 2020

title

Structure of HIV-1 quasi-species as early indicator for switches of co-receptor tropism (English)

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17 January 2020

2

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17 January 2020

Daniel Hoffmann

series ordinal

3

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17 January 2020

author name string

J Nikolaj Dybowski

series ordinal

1

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17 January 2020

publication date

30 November 2010

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AIDS Research and Therapy

17 January 2020

published in

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17 January 2020

volume

7

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17 January 2020

page(s)

41

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HIV-1 V3 envelope deep sequencing for clinical plasma specimens failing in phenotypic tropism assays

17 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3009693

Prediction of co-receptor usage of HIV-1 from genotype

21 June 2018

1 reference

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Quantitative deep sequencing reveals dynamic HIV-1 escape and large population shifts during CCR5 antagonist therapy in vivo

21 June 2018

1 reference

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Structural descriptors of gp120 V3 loop for the prediction of HIV-1 coreceptor usage

21 June 2018

1 reference

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Development and characterization of a novel single-cycle recombinant-virus assay to determine human immunodeficiency virus type 1 coreceptor tropism

21 June 2018

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Discovery and characterization of vicriviroc (SCH 417690), a CCR5 antagonist with potent activity against human immunodeficiency virus type 1

21 June 2018

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Maraviroc (UK-427,857), a potent, orally bioavailable, and selective small-molecule inhibitor of chemokine receptor CCR5 with broad-spectrum anti-human immunodeficiency virus type 1 activity

21 June 2018

1 reference

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Improved coreceptor usage prediction and genotypic monitoring of R5-to-X4 transition by motif analysis of human immunodeficiency virus type 1 env V3 loop sequences

21 June 2018

1 reference

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Improved success of phenotype prediction of the human immunodeficiency virus type 1 from envelope variable loop 3 sequence using neural networks

21 June 2018

1 reference

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Chemokine receptors as HIV-1 coreceptors: roles in viral entry, tropism, and disease

21 June 2018

1 reference

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Change in coreceptor use correlates with disease progression in HIV-1--infected individuals

21 June 2018

1 reference

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Chemokines and HIV-1 second receptors. Confluence of two fields generates optimism in AIDS research

21 June 2018

1 reference

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Identification of common molecular subsequences

21 June 2018

1 reference

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A simple method for displaying the hydropathic character of a protein

21 June 2018

1 reference

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A general method applicable to the search for similarities in the amino acid sequence of two proteins

21 June 2018

1 reference

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Amino acid substitution matrices from protein blocks

21 June 2018

1 reference

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Design and validation of new genotypic tools for easy and reliable estimation of HIV tropism before using CCR5 antagonists.

21 June 2018

1 reference

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Predicting HIV coreceptor usage on the basis of genetic and clinical covariates.

30 October 2018

1 reference

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Current V3 genotyping algorithms are inadequate for predicting X4 co-receptor usage in clinical isolates.

30 October 2018

1 reference

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Determining human immunodeficiency virus coreceptor use in a clinical setting: degree of correlation between two phenotypic assays and a bioinformatic model

30 October 2018

1 reference

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A new perspective on V3 phenotype prediction.

30 October 2018

1 reference

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Improved prediction of coreceptor usage and phenotype of HIV-1 based on combined features of V3 loop sequence using random forest

30 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21118549

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1742-6405-7-41

1 reference

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Dimensions Publication ID

17 January 2020

0 references

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17 January 2020

PubMed publication ID

21118549

1 reference