CTCF-dependent chromatin bias constitutes transient epigenetic memory of the mother at the H19-Igf2 imprinting control region in prospermatogonia. (Q33760850)

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English	CTCF-dependent chromatin bias constitutes transient epigenetic memory of the mother at the H19-Igf2 imprinting control region in prospermatogonia.	scientific article

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17 January 2020

CTCF-dependent chromatin bias constitutes transient epigenetic memory of the mother at the H19-Igf2 imprinting control region in prospermatogonia (English)

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17 January 2020

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based on heuristic

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epigenetic memory

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based on heuristic

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Piroska E Szabó

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17 January 2020

author name string

Dong-Hoon Lee

1

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17 January 2020

Purnima Singh

2

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17 January 2020

Shirley Y Tsai

3

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Nathan Oates

4

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Alexander Spalla

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17 January 2020

Claudio Spalla

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17 January 2020

Lucy Brown

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Guillermo Rivas

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17 January 2020

Garrett Larson

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17 January 2020

Tibor A Rauch

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17 January 2020

Gerd P Pfeifer

11

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17 January 2020

publication date

24 November 2010

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17 January 2020

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17 January 2020

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17 January 2020

11

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17 January 2020

e1001224

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17 January 2020

copyright license

Creative Commons Attribution 4.0 International

24 November 2010

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April 2022 Public Data File from Crossref

copyright status

0 references

Examination of the specificity of DNA methylation profiling techniques towards 5-methylcytosine and 5-hydroxymethylcytosine

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28 July 2018

Allele-specific H3K79 Di- versus trimethylation distinguishes opposite parental alleles at imprinted regions

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28 July 2018

Mutational analysis of the poly(ADP-ribosyl)ation sites of the transcription factor CTCF provides an insight into the mechanism of its regulation by poly(ADP-ribosyl)ation

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28 July 2018

Structural basis for recognition of H3K4 methylation status by the DNA methyltransferase 3A ATRX-DNMT3-DNMT3L domain

1 reference

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28 July 2018

KDM1B is a histone H3K4 demethylase required to establish maternal genomic imprints

1 reference

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28 July 2018

The nuclear DNA base 5-hydroxymethylcytosine is present in Purkinje neurons and the brain

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28 July 2018

Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1

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28 July 2018

The LPS-induced transcriptional upregulation of the chicken lysozyme locus involves CTCF eviction and noncoding RNA transcription.

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28 July 2018

CTCF regulates allelic expression of Igf2 by orchestrating a promoter-polycomb repressive complex 2 intrachromosomal loop

1 reference

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28 July 2018

Chromatin dynamics during epigenetic reprogramming in the mouse germ line

1 reference

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28 July 2018

RNA expression microarray analysis in mouse prospermatogonia: identification of candidate epigenetic modifiers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991272

28 July 2018

CTCF is the master organizer of domain-wide allele-specific chromatin at the H19/Igf2 imprinted region

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991272

28 July 2018

Differential histone modifications mark mouse imprinting control regions during spermatogenesis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991272

28 July 2018

The testis-specific factor CTCFL cooperates with the protein methyltransferase PRMT7 in H19 imprinting control region methylation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991272

28 July 2018

A single nucleotide polymorphism based approach for the identification and characterization of gene expression modulation using MassARRAY.

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28 July 2018

DNA methyltransferase expression in the mouse germ line during periods of de novo methylation

1 reference

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28 July 2018

CTCF is conserved from Drosophila to humans and confers enhancer blocking of the Fab-8 insulator

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991272

28 July 2018

Essential role for de novo DNA methyltransferase Dnmt3a in paternal and maternal imprinting

1 reference

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28 July 2018

Role of CTCF binding sites in the Igf2/H19 imprinting control region

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991272

28 July 2018

Suv39h-mediated histone H3 lysine 9 methylation directs DNA methylation to major satellite repeats at pericentric heterochromatin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991272

28 July 2018

The nucleotides responsible for the direct physical contact between the chromatin insulator protein CTCF and the H19 imprinting control region manifest parent of origin-specific long-distance insulation and methylation-free domains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991272

28 July 2018

Genomic imprinting--insights from studies in mice.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991272

28 July 2018

The DNA methyltransferase-like protein DNMT3L stimulates de novo methylation by Dnmt3a

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991272

28 July 2018

Domain regulation of imprinting cluster in Kip2/Lit1 subdomain on mouse chromosome 7F4/F5: large-scale DNA methylation analysis reveals that DMR-Lit1 is a putative imprinting control region

1 reference

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28 July 2018

CTCF maintains differential methylation at the Igf2/H19 locus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991272

28 July 2018

Regional loss of imprinting and growth deficiency in mice with a targeted deletion of KvDMR1

1 reference

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28 July 2018

BORIS, a novel male germ-line-specific protein associated with epigenetic reprogramming events, shares the same 11-zinc-finger domain with CTCF, the insulator protein involved in reading imprinting marks in the soma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991272

28 July 2018

Dnmt3L cooperates with the Dnmt3 family of de novo DNA methyltransferases to establish maternal imprints in mice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991272

28 July 2018

Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991272

28 July 2018

A histone H3 methyltransferase controls DNA methylation in Neurospora crassa

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991272

28 July 2018

Regulatory mechanisms at the mouse Igf2/H19 locus.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991272

28 July 2018

Methylated DNA sequences in genomic imprinting.

1 reference

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28 July 2018

Genomic imprinting: parental influence on the genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991272

28 July 2018

A transcriptional insulator at the imprinted H19/Igf2 locus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991272

28 July 2018

H19 and Igf2 monoallelic expression is regulated in two distinct ways by a shared cis acting regulatory region upstream of H19.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991272

28 July 2018

The protein CTCF is required for the enhancer blocking activity of vertebrate insulators

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991272

28 July 2018

Mechanisms of genomic imprinting

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991272

28 July 2018

Deletion of the H19 differentially methylated domain results in loss of imprinted expression of H19 and Igf2.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991272

28 July 2018

A 5' 2-kilobase-pair region of the imprinted mouse H19 gene exhibits exclusive paternal methylation throughout development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991272

28 July 2018

Deletion of the H19 transcription unit reveals the existence of a putative imprinting control element

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991272

28 July 2018

A modified and improved method for bisulphite based cytosine methylation analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991272

28 July 2018

An exceptionally conserved transcriptional repressor, CTCF, employs different combinations of zinc fingers to bind diverged promoter sequences of avian and mammalian c-myc oncogenes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991272

28 July 2018

Role for DNA methylation in genomic imprinting

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991272

28 July 2018

An enhancer deletion affects both H19 and Igf2 expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991272

28 July 2018

Disruption of imprinting caused by deletion of the H19 gene region in mice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2991272

28 July 2018

Imprinting and the epigenetic asymmetry between parental genomes.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001224

21 January 2018

Imprinted expression of the Igf2r gene depends on an intronic CpG island.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001224

21 January 2018

Molecular biology. Mothers setting boundaries.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001224

21 January 2018

Identification of an imprinting control region affecting the expression of all transcripts in the Gnas cluster.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001224

21 January 2018

Dnmt3L and the establishment of maternal genomic imprints.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001224

21 January 2018

A paternal-specific methylation imprint marks the alleles of the mouse H19 gene.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001224

21 January 2018

Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001224

21 January 2018

CTCF mediates methylation-sensitive enhancer-blocking activity at the H19/Igf2 locus

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001224

21 January 2018

Maternal-specific footprints at putative CTCF sites in the H19 imprinting control region give evidence for insulator function.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001224

21 January 2018

The H19 methylation imprint is erased and re-established differentially on the parental alleles during male germ cell development.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001224

21 January 2018

Timing of establishment of paternal methylation imprints in the mouse.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001224

21 January 2018

The paternal methylation imprint of the mouse H19 locus is acquired in the gonocyte stage during foetal testis development.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001224

21 January 2018

Role of the Dnmt3 family in de novo methylation of imprinted and repetitive sequences during male germ cell development in the mouse.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001224

21 January 2018

Acquisition of the H19 methylation imprint occurs differentially on the parental alleles during spermatogenesis.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001224

21 January 2018

Allele-specific expression of imprinted genes in mouse migratory primordial germ cells.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001224

21 January 2018

Biallelic expression of imprinted genes in the mouse germ line: implications for erasure, establishment, and mechanisms of genomic imprinting

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001224

21 January 2018

Extensive and orderly reprogramming of genome-wide chromatin modifications associated with specification and early development of germ cells in mice.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001224

21 January 2018

Cellular dynamics associated with the genome-wide epigenetic reprogramming in migrating primordial germ cells in mice.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001224

21 January 2018

Oocyte growth-dependent progression of maternal imprinting in mice.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001224

21 January 2018

Trimethylated lysine 9 of histone H3 is a mark for DNA methylation in Neurospora crassa

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001224

21 January 2018

Dimethylation of histone H3 lysine 9 is a critical mark for DNA methylation and gene silencing in Arabidopsis thaliana.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001224

21 January 2018

Windows for sex-specific methylation marked by DNA methyltransferase expression profiles in mouse germ cells

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001224

21 January 2018

Co-expression of de novo DNA methyltransferases Dnmt3a2 and Dnmt3L in gonocytes of mouse embryos

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001224

21 January 2018

Gene-specific timing and epigenetic memory in oocyte imprinting.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001224

21 January 2018

Epigenetic reprogramming in mouse primordial germ cells

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1001224

21 January 2018

Functional association of CTCF with the insulator upstream of the H19 gene is parent of origin-specific and methylation-sensitive

1 reference

https://pubmed.ncbi.nlm.nih.gov/21124827

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Epigenetic mechanisms underlying the imprinting of the mouse H19 gene

1 reference

https://pubmed.ncbi.nlm.nih.gov/21124827

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Isolation and culture of primordial germ cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/21124827

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PGEN.1001224

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21124827%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21124827%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21124827%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

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