Molecular-crowding effects on single-molecule RNA folding/unfolding thermodynamics and kinetics (Q33767774)

29 July 2017

Molecular-crowding effects on single-molecule RNA folding/unfolding thermodynamics and kinetics (English)

1 reference

29 July 2017

0 references

3

David J Nesbitt

1 reference

29 July 2017

Nicholas F Dupuis

1

1 reference

PubMed ID

24850865

29 July 2017

Erik D Holmstrom

series ordinal

2

1 reference

PubMed ID

24850865

29 July 2017

language of work or name

English

0 references

publication date

21 May 2014

1 reference

Proceedings of the National Academy of Sciences of the United States of America

29 July 2017

1 reference

29 July 2017

111

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29 July 2017

23

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29 July 2017

8464-8469

1 reference

Thermodynamic origins of monovalent facilitated RNA folding

29 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4060727

Entropic origin of Mg2+-facilitated RNA folding

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4060727

Separation of preferential interaction and excluded volume effects on DNA duplex and hairpin stability

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4060727

Molecular crowding stabilizes folded RNA structure by the excluded volume effect

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4060727

Solvent viscosity and friction in protein folding dynamics

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4060727

Enthalpy-driven RNA folding: single-molecule thermodynamics of tetraloop-receptor tertiary interaction

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4060727

Monovalent and divalent promoted GAAA tetraloop-receptor tertiary interactions from freely diffusing single-molecule studies

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4060727

Macromolecular crowding and confinement: biochemical, biophysical, and potential physiological consequences

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4060727

Molecular crowding enhances native structure and stability of alpha/beta protein flavodoxin

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4060727

Effects of osmolytes on RNA secondary and tertiary structure stabilities and RNA-Mg2+ interactions

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4060727

Macromolecular crowding induces a molten globule state in the C-terminal domain of histone H1.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4060727

Metal ion dependence, thermodynamics, and kinetics for intramolecular docking of a GAAA tetraloop and receptor connected by a flexible linker

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4060727

Metal ions and RNA folding: a highly charged topic with a dynamic future

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4060727

Molecular crowding enhances native state stability and refolding rates of globular proteins

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4060727

Sequence elements outside the hammerhead ribozyme catalytic core enable intracellular activity

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4060727

Hierarchy and dynamics of RNA folding

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4060727

Crystal structure of a group I ribozyme domain: principles of RNA packing

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4060727

How crowded is the cytoplasm?

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4060727

Crowding promotes the switch from hairpin to pseudoknot conformation in human telomerase RNA.

28 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1316039111

The effect of molecular crowding with nucleotide length and cosolute structure on DNA duplex stability

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1316039111

The role of counterion valence and size in GAAA tetraloop-receptor docking/undocking kinetics

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1316039111

Effects of crowding and confinement on the structures of the transition state ensemble in proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1316039111

Control of memory formation through regulated expression of a CaMKII transgene

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1316039111

Protein folding and binding in confined spaces and in crowded solutions

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1316039111

Stabilization of Proteins in Confined Spaces†

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1316039111

21 January 2018

Macromolecular crowding

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24850865

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Facilitation of RNA enzyme activity in the molecular crowding media of cosolutes

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24850865

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The molecular interactions that stabilize RNA tertiary structure: RNA motifs, patterns, and networks

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24850865

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.1316039111

1 reference

29 July 2017

0 references

1 reference

29 July 2017

1 reference

PubMed ID

24850865