Evolution of envelope sequences from the genital tract and peripheral blood of women infected with clade A human immunodeficiency virus type 1. (Q33784911)

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English	Evolution of envelope sequences from the genital tract and peripheral blood of women infected with clade A human immunodeficiency virus type 1.	scientific article

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scholarly article

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PubMed publication ID

29 July 2017

Evolution of envelope sequences from the genital tract and peripheral blood of women infected with clade A human immunodeficiency virus type 1. (English)

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29 July 2017

sexual transmission

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author name string

M Poss

1

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29 July 2017

A G Rodrigo

2

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29 July 2017

J J Gosink

3

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29 July 2017

G H Learn

4

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29 July 2017

D de Vange Panteleeff

5

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29 July 2017

H L Martin

6

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29 July 2017

J Bwayo

7

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29 July 2017

J K Kreiss

8

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29 July 2017

J Overbaugh

9

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29 July 2017

language of work or name

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publication date

1 October 1998

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29 July 2017

Journal of Virology

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29 July 2017

72

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29 July 2017

10

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29 July 2017

8240-8251

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29 July 2017

Human immunodeficiency virus type 1 populations in blood and semen

1 reference

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4 July 2018

Cell-free human immunodeficiency virus type 1 in breast milk

1 reference

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4 July 2018

Slower evolution of human immunodeficiency virus type 1 quasispecies during progression to AIDS

1 reference

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4 July 2018

Divergent patterns of progression to AIDS after infection from the same source: human immunodeficiency virus type 1 evolution and antiviral responses

1 reference

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4 July 2018

Phylogenetic evaluation of Kenyan HIV type 1 isolates

1 reference

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4 July 2018

Evolutionary mechanisms and population dynamics of the third variable envelope region of HIV within single hosts

1 reference

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4 July 2018

Host-specific driving force in human immunodeficiency virus type 1 evolution in vivo

1 reference

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4 July 2018

Evolution of human immunodeficiency virus type 1 env sequence variation in patients with diverse rates of disease progression and T-cell function

1 reference

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4 July 2018

Antiviral pressure exerted by HIV-1-specific cytotoxic T lymphocytes (CTLs) during primary infection demonstrated by rapid selection of CTL escape virus

1 reference

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4 July 2018

Human immunodeficiency virus type 1 molecular evolution and the measure of selection

1 reference

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4 July 2018

Distinct but related human immunodeficiency virus type 1 variant populations in genital secretions and blood

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

4 July 2018

Genetic characterization of human immunodeficiency virus type 1 in blood and genital secretions: evidence for viral compartmentalization and selection during sexual transmission

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

4 July 2018

HIV-1 dynamics in vivo: virion clearance rate, infected cell life-span, and viral generation time

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

4 July 2018

A single amino acid substitution in the V1 loop of human immunodeficiency virus type 1 gp120 alters cellular tropism.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

4 July 2018

Selection for specific sequences in the external envelope protein of human immunodeficiency virus type 1 upon primary infection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

4 July 2018

HIV infection is active and progressive in lymphoid tissue during the clinically latent stage of disease

1 reference

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4 July 2018

Increasing antigenic and genetic diversity of the V3 variable domain of the human immunodeficiency virus envelope protein in the course of the AIDS epidemic

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

4 July 2018

Genotypic and phenotypic characterization of HIV-1 patients with primary infection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

4 July 2018

Temporal association of cellular immune responses with the initial control of viremia in primary human immunodeficiency virus type 1 syndrome

1 reference

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4 July 2018

Demented and nondemented patients with AIDS differ in brain-derived human immunodeficiency virus type 1 envelope sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

4 July 2018

Rapid and simple PCR assay for quantitation of human immunodeficiency virus type 1 RNA in plasma: application to acute retroviral infection.

1 reference

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4 July 2018

Functional role of the V1/V2 region of human immunodeficiency virus type 1 envelope glycoprotein gp120 in infection of primary macrophages and soluble CD4 neutralization.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

4 July 2018

Matrix correlation tests support a single origin for modern humans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

4 July 2018

Human immunodeficiency virus type 1 evolution in vivo tracked by DNA heteroduplex mobility assays.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

4 July 2018

MEGA: Molecular Evolutionary Genetics Analysis software for microcomputers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

4 July 2018

Human immunodeficiency virus type 1 strains in the lungs of infected individuals evolve independently from those in peripheral blood and are highly conserved in the C-terminal region of the envelope V3 loop

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

4 July 2018

Insertion of N-linked glycosylation sites in the variable regions of the human immunodeficiency virus type 1 surface glycoprotein through AAT triplet reiteration.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

4 July 2018

Genetic differences between blood- and brain-derived viral sequences from human immunodeficiency virus type 1-infected patients: evidence of conserved elements in the V3 region of the envelope protein of brain-derived sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

4 July 2018

Sequence diversity of V1 and V2 domains of gp120 from human immunodeficiency virus type 1: lack of correlation with viral phenotype.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

4 July 2018

HIV population dynamics in vivo: implications for genetic variation, pathogenesis, and therapy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

4 July 2018

Antigenic oscillations and shifting immunodominance in HIV-1 infections.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

4 July 2018

HIV pathogenesis. Lines drawn in epitope wars

1 reference

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4 July 2018

Viral dynamics in human immunodeficiency virus type 1 infection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

4 July 2018

Virus escape from CTL recognition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

4 July 2018

Mutagenicity and pausing of HIV reverse transcriptase during HIV plus-strand DNA synthesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

4 July 2018

Diversity in virus populations from genital secretions and peripheral blood from women recently infected with human immunodeficiency virus type 1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

4 July 2018

Intrahost human immunodeficiency virus type 1 evolution is related to length of the immunocompetent period

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

4 July 2018

Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions

1 reference

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4 July 2018

Extensive variation of human immunodeficiency virus type-1 in vivo

1 reference

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4 July 2018

Isolates of human immunodeficiency virus type 1 from the brain may constitute a special group of the AIDS virus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

4 July 2018

A cladistic measure of gene flow inferred from the phylogenies of alleles

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

4 July 2018

Characterization of HIV-1 neutralization escape mutants

1 reference

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4 July 2018

Rapid development of isolate-specific neutralizing antibodies after primary HIV-1 infection and consequent emergence of virus variants which resist neutralization by autologous sera.

1 reference

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4 July 2018

Detecting isolation by distance using phylogenies of genes

1 reference

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4 July 2018

HIV-1 tropism for mononuclear phagocytes can be determined by regions of gp120 outside the CD4-binding domain

1 reference

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4 July 2018

Biological and molecular features of HIV-1 related to tissue tropism

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4 July 2018

Concurrent evolution of human immunodeficiency virus type 1 in patients infected from the same source: rate of sequence change and low frequency of inactivating mutations

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Characterization of human immunodeficiency virus type 1 strains recovered from the bowel of infected individuals

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4 July 2018

Immunodominance and antigenic variation of the principal neutralization domain of HIV-1.

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4 July 2018

HIV-1 V3 domain variation in brain and spleen of children with AIDS: tissue-specific evolution within host-determined quasispecies

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Macrophage and T cell-line tropisms of HIV-1 are determined by specific regions of the envelope gp120 gene

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4 July 2018

Identification of the envelope V3 loop as the primary determinant of cell tropism in HIV-1.

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4 July 2018

Pairwise comparisons of mitochondrial DNA sequences in stable and exponentially growing populations

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Autologous HIV-1 neutralizing antibodies: emergence of neutralization-resistant escape virus and subsequent development of escape virus neutralizing antibodies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

4 July 2018

The region of the envelope gene of human immunodeficiency virus type 1 responsible for determination of cell tropism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

4 July 2018

Rapid and simple method for purification of nucleic acids

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

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Antigenic Diversity Thresholds and the Development of AIDS

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

4 July 2018

Convergent and divergent sequence evolution in the surface envelope glycoprotein of human immunodeficiency virus type 1 within a single infected patient

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

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Alterations in potential sites for glycosylation predominate during evolution of the simian immunodeficiency virus envelope gene in macaques

1 reference

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Relationship of human immunodeficiency virus type 1 sequence heterogeneity to stage of disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

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1 reference

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4 July 2018

HIV-1 genomic RNA diversification following sexual and parenteral virus transmission

1 reference

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4 July 2018

Tissue-specific migration pathways by phenotypically distinct subpopulations of memory T cells.

1 reference

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4 July 2018

DNA sequencing with chain-terminating inhibitors

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Primary infections with HIV-1 of women and their offspring in Rwanda: findings of heterogeneity at seroconversion, coinfection, and recombinants of HIV-1 subtypes A and C.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

30 October 2018

Functional characterization of the V1V2 region of human immunodeficiency virus type 1.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=110179

30 October 2018

Adaptive evolution of human immunodeficiency virus-type 1 during the natural course of infection

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30 October 2018

Causes of HIV diversity

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30 October 2018

Genetic variation in AIDS viruses

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30 October 2018

Rapid generation of sequence variation during primary HIV-1 infection.

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30 October 2018

Biologically diverse molecular variants within a single HIV-1 isolate

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30 October 2018

Preparation for AIDS vaccine evaluation in Mombasa, Kenya: establishment of seronegative cohorts of commercial sex workers and trucking company employees

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12 December 2020

based on heuristic

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Single amino-acid changes in HIV envelope affect viral tropism and receptor binding

1 reference

https://pubmed.ncbi.nlm.nih.gov/9733867

12 December 2020

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inferred from PubMed ID database lookup

Massive covert infection of helper T lymphocytes and macrophages by HIV during the incubation period of AIDS

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https://pubmed.ncbi.nlm.nih.gov/9733867

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

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