Comparison of RNA-Seq by poly (A) capture, ribosomal RNA depletion, and DNA microarray for expression profiling (Q33805247)

29 July 2017

Comparison of RNA-Seq by poly (A) capture, ribosomal RNA depletion, and DNA microarray for expression profiling (English)

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29 July 2017

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6

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6 June 2020

Katherine A. Hoadley

3

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6 June 2020

author name string

Wei Zhao

1

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6 June 2020

Xiaping He

2

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6 June 2020

Joel S Parker

4

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6 June 2020

David Neil Hayes

5

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6 June 2020

language of work or name

English

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publication date

2 June 2014

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29 July 2017

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6 June 2020

volume

15

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6 June 2020

page(s)

419

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https://scigraph.springernature.com/pub.10.1186/1471-2164-15-419

6 June 2020

exact match

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cites work

Gene expression, single nucleotide variant and fusion transcript discovery in archival material from breast tumors

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The UCSC Genome Browser database: 2014 update

28 July 2018

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Comprehensive analysis of long non-coding RNAs in ovarian cancer reveals global patterns and targeted DNA amplification

28 July 2018

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Reliable identification of genomic variants from RNA-seq data

28 July 2018

1 reference

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Large scale comparison of gene expression levels by microarrays and RNAseq using TCGA data

28 July 2018

1 reference

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Comparative analysis of RNA sequencing methods for degraded or low-input samples

28 July 2018

1 reference

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Integrated genomic characterization of endometrial carcinoma

28 July 2018

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Development of strategies for SNP detection in RNA-seq data: application to lymphoblastoid cell lines and evaluation using 1000 Genomes data

28 July 2018

1 reference

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Micro-scale genomic DNA copy number aberrations as another means of mutagenesis in breast cancer

28 July 2018

1 reference

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Comprehensive molecular portraits of human breast tumours

28 July 2018

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Comprehensive genomic characterization of squamous cell lung cancers

28 July 2018

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Landscape of transcription in human cells

28 July 2018

1 reference

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Evaluation of the coverage and depth of transcriptome by RNA-Seq in chickens

28 July 2018

1 reference

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Non-coding RNAs in human disease

28 July 2018

1 reference

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RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

28 July 2018

1 reference

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Comparative oncogenomics identifies breast tumors enriched in functional tumor-initiating cells

28 July 2018

1 reference

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From RNA-seq reads to differential expression results

28 July 2018

1 reference

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Integrated genomic analysis identifies clinically relevant subtypes of glioblastoma characterized by abnormalities in PDGFRA, IDH1, EGFR, and NF1

28 July 2018

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Supervised risk predictor of breast cancer based on intrinsic subtypes

28 July 2018

1 reference

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Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing

28 July 2018

1 reference

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A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome

28 July 2018

1 reference

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RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays

28 July 2018

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Mapping and quantifying mammalian transcriptomes by RNA-Seq

28 July 2018

1 reference

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Agreement in breast cancer classification between microarray and quantitative reverse transcription PCR from fresh-frozen and formalin-fixed, paraffin-embedded tissues

28 July 2018

1 reference

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Simple cDNA normalization using kamchatka crab duplex-specific nuclease

28 July 2018

1 reference

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Long non-coding RNAs: new players in cell differentiation and development

28 July 2018

1 reference

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Ribosomal RNA depletion for efficient use of RNA-seq capacity

30 October 2018

1 reference

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Integrative genomic analyses reveal clinically relevant long noncoding RNAs in human cancer

30 October 2018

1 reference

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MapSplice: accurate mapping of RNA-seq reads for splice junction discovery.

30 October 2018

1 reference

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Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms

30 October 2018

1 reference

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30 October 2018

Identifiers

DOI

10.1186/1471-2164-15-419

1 reference

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Dimensions Publication ID

6 June 2020

0 references

1 reference

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6 June 2020

1 reference

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