Dengue-2 structural proteins associate with human proteins to produce a coagulation and innate immune response biased interactome (Q33807905)

29 July 2017

Dengue-2 structural proteins associate with human proteins to produce a coagulation and innate immune response biased interactome (English)

1 reference

dengue virus capsid protein

29 July 2017

1 reference

1 reference

dengue virus envelope protein

inferred from abstract

1 reference

inferred from abstract

dengue virus protein prM

1 reference

modulation by virus of host process

inferred from abstract

0 references

modulation by host of viral process

0 references

author

Almeriane M Weffort-Santos

object named as

Almeriane M Weffort-Santos

2

0 references

author name string

Brenda B Folly

1

1 reference

29 July 2017

C G Fathman

3

1 reference

29 July 2017

Luis R B Soares

4

1 reference

29 July 2017

31 January 2011

1 reference

29 July 2017

BMC Infectious Diseases

1 reference

29 July 2017

11

1 reference

29 July 2017

34

1 reference

describes a project that uses

29 July 2017

Cytoscape

object named as

Cytoscape

2 references

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

exact match

https://scigraph.springernature.com/pub.10.1186/1471-2334-11-34

0 references

cites work

Chloride channels of intracellular membranes

1 reference

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Gene Expression Profiling during Early Acute Febrile Stage of Dengue Infection Can Predict the Disease Outcome

4 July 2018

1 reference

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HMGB proteins function as universal sentinels for nucleic-acid-mediated innate immune responses

4 July 2018

1 reference

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KEGG for representation and analysis of molecular networks involving diseases and drugs

4 July 2018

1 reference

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The IntAct molecular interaction database in 2010

4 July 2018

1 reference

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An evolutionary conserved function of the JAK-STAT pathway in anti-dengue defense

4 July 2018

1 reference

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Dealing with low pH: entry and exit of alphaviruses and flaviviruses

4 July 2018

1 reference

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A re-evaluation of the mechanisms leading to dengue hemorrhagic fever

4 July 2018

1 reference

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Specific interaction of capsid protein and importin-alpha/beta influences West Nile virus production

4 July 2018

1 reference

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Cross-talk between Rac1 and Cdc42 GTPases regulates formation of filopodia required for dengue virus type-2 entry into HMEC-1 cells.

4 July 2018

1 reference

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BioMart Central Portal--unified access to biological data

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Hemopexin down-regulates LPS-induced proinflammatory cytokines from macrophages

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Dengue virus infection promotes translocation of high mobility group box 1 protein from the nucleus to the cytosol in dendritic cells, upregulates cytokine production and modulates virus replication

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Alterations in actin cytoskeletal assembly and junctional protein complexes in human endothelial cells induced by dengue virus infection and mimicry of leukocyte transendothelial migration

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Human TLR3 recognizes dengue virus and modulates viral replication in vitro

4 July 2018

1 reference

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Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

4 July 2018

1 reference

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Human Protein Reference Database--2009 update

4 July 2018

1 reference

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Hepatitis C virus infection protein network

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Oxidative stress in severe dengue viral infection: association of thrombocytopenia with lipid peroxidation

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

The Aedes aegypti Toll Pathway Controls Dengue Virus Infection

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Differences in global gene expression in peripheral blood mononuclear cells indicate a significant role of the innate responses in progression of dengue fever but not dengue hemorrhagic fever

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Sticking together? Falling apart? Exploring the dynamics of the interactome

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Function, structure and regulation of the vacuolar (H+)-ATPases

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Differential Gene Expression Changes in Children with Severe Dengue Virus Infections

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Structure of the immature dengue virus at low pH primes proteolytic maturation

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Alternate hypothesis on the pathogenesis of dengue hemorrhagic fever (DHF)/dengue shock syndrome (DSS) in dengue virus infection

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

The ORF3 protein of hepatitis E virus interacts with hemopexin by means of its 26 amino acid N-terminal hydrophobic domain II.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Signaling to NF-kappaB by Toll-like receptors

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Secreted complement regulatory protein clusterin interacts with dengue virus nonstructural protein 1.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Signaling crossroads: the function of Raf kinase inhibitory protein in cancer, the central nervous system and reproduction

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Dengue hemorrhagic fever with special emphasis on immunopathogenesis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Interaction between the Cellular Protein eEF1A and the 3'-Terminal Stem-Loop of West Nile Virus Genomic RNA Facilitates Viral Minus-Strand RNA Synthesis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Nuclear localization of dengue virus nonstructural protein 5 through its importin alpha/beta-recognized nuclear localization sequences is integral to viral infection.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Epstein-Barr virus and virus human protein interaction maps

4 July 2018

1 reference

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Flavivirus activation of plasmacytoid dendritic cells delineates key elements of TLR7 signaling beyond endosomal recognition

4 July 2018

1 reference

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Dengue-virus-infected dendritic cells trigger vascular leakage through metalloproteinase overproduction

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

c-Src control of chloride channel support for osteoclast HCl transport and bone resorption

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Innate immune responses: crosstalk of signaling and regulation of gene transcription

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Identification of RELT homologues that associate with RELT and are phosphorylated by OSR1.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

BioGRID: a general repository for interaction datasets

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

High mobility group box 1 protein interacts with multiple Toll-like receptors

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Scale-free networks in cell biology

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

WebGestalt: an integrated system for exploring gene sets in various biological contexts

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Infection-stimulated fibrin deposition controls hemorrhage and limits hepatic bacterial growth during listeriosis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

BiNGO: a Cytoscape plugin to assess overrepresentation of gene ontology categories in biological networks

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Down-regulation of heme oxygenase-1 by hepatitis C virus infection in vivo and by the in vitro expression of hepatitis C core protein

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Characterization of OSR1, a member of the mammalian Ste20p/germinal center kinase subfamily

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Two isoforms of otubain 1 regulate T cell anergy via GRAIL

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Cytoscape: a software environment for integrated models of biomolecular interaction networks

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Myosin phosphatase-Rho interacting protein. A new member of the myosin phosphatase complex that directly binds RhoA.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Membrane traffic fuses with cartilage development

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

DAVID: Database for Annotation, Visualization, and Integrated Discovery

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Bench-to-bedside review: functional relationships between coagulation and the innate immune response and their respective roles in the pathogenesis of sepsis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Translation elongation factor-1alpha, La, and PTB interact with the 3' untranslated region of dengue 4 virus RNA

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

DIP, the Database of Interacting Proteins: a research tool for studying cellular networks of protein interactions

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Raf kinase inhibitor protein interacts with NF-kappaB-inducing kinase and TAK1 and inhibits NF-kappaB activation

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Importin 13: a novel mediator of nuclear import and export

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

JNK2 and IKKbeta are required for activating the innate response to viral infection

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

KEGG: kyoto encyclopedia of genes and genomes

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Human p21-activated kinase (Pak1) regulates actin organization in mammalian cells

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Construction of infectious cDNA clones for dengue 2 virus: strain 16681 and its attenuated vaccine derivative, strain PDK-53.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

The contribution of leukocyte proteases to fibrinolysis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Role of plasmin and gelatinase in extracellular matrix degradation by cultured rat mesangial cells

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

The Murray Valley encephalitis virus prM protein confers acid resistance to virus particles and alters the expression of epitopes within the R2 domain of E glycoprotein

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037883

Computing topological parameters of biological networks.

4 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2334-11-34

‘Complementing’ viral infection: mechanisms for evading innate immunity

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2334-11-34

Plasminogen binds to disease-associated prion protein of multiple species.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2334-11-34

Stage-specific Importin13 activity influences meiosis of germ cells in the mouse.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2334-11-34

Unraveling the protective effect of a Drosophila phosphatidylethanolamine-binding protein upon bacterial infection by means of proteomics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2334-11-34

Cerebrospinal fluid proteomics reveals potential pathogenic changes in the brains of SIV-infected monkeys

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2334-11-34

The HCV serum proteome: a search for fibrosis protein markers

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2334-11-34

Activation of the lectin DC-SIGN induces an immature dendritic cell phenotype triggering Rho-GTPase activity required for HIV-1 replication

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2334-11-34

Binding and activation of plasminogen on the platelet surface

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21281507

12 December 2020

inferred from PubMed ID database lookup

An endothelial cell receptor for plasminogen/tissue plasminogen activator (t-PA). II. Annexin II-mediated enhancement of t-PA-dependent plasminogen activation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21281507

12 December 2020

inferred from PubMed ID database lookup

Complement component C7 is a plasminogen-binding protein

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21281507

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1186/1471-2334-11-34

1 reference

Dimensions Publication ID

29 July 2017

0 references

1 reference

29 July 2017

1 reference