Integration of lipidomics and transcriptomics data towards a systems biology model of sphingolipid metabolism (Q33814929)

29 July 2017

Integration of lipidomics and transcriptomics data towards a systems biology model of sphingolipid metabolism (English)

1 reference

29 July 2017

0 references

1 reference

1 reference

4

Christopher K Glass

1 reference

29 July 2017

Shakti Gupta

1

1 reference

29 July 2017

Mano R Maurya

series ordinal

2

1 reference

29 July 2017

Alfred H Merrill

series ordinal

3

1 reference

29 July 2017

Shankar Subramaniam

series ordinal

5

1 reference

29 July 2017

8 February 2011

1 reference

29 July 2017

1 reference

29 July 2017

5

1 reference

29 July 2017

26

1 reference

https://scigraph.springernature.com/pub.10.1186/1752-0509-5-26

29 July 2017

0 references

cites work

A mouse macrophage lipidome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047436

Visualization of omics data for systems biology

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047436

Glycosphingolipids--nature, function, and pharmacological modulation.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047436

Gangliosides in cell recognition and membrane protein regulation

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047436

An integrated model of eicosanoid metabolism and signaling based on lipidomics flux analysis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047436

Bioactive sphingolipids: metabolism and function

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047436

Sphingosine-1-phosphate: the Swiss army knife of sphingolipid signaling

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047436

The role of sphingosine-1-phosphate and ceramide-1-phosphate in calcium homeostasis.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047436

Ceramide kinase and the ceramide-1-phosphate/cPLA2alpha interaction as a therapeutic target

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047436

Sphingosine-1-phosphate lyase in development and disease: sphingolipid metabolism takes flight

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047436

Ceramide kinase: a potential anti-inflammatory target?

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047436

Mathematical modeling of pathogenicity of Cryptococcus neoformans

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047436

The sphingolipid salvage pathway in ceramide metabolism and signaling

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047436

Structure-specific, quantitative methods for analysis of sphingolipids by liquid chromatography-tandem mass spectrometry: "inside-out" sphingolipidomics

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047436

Translational aspects of sphingolipid metabolism

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047436

A kinetic model for calcium dynamics in RAW 264.7 cells: 1. Mechanisms, parameters, and subpopulational variability

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047436

Ceramides and other bioactive sphingolipid backbones in health and disease: lipidomic analysis, metabolism and roles in membrane structure, dynamics, signaling and autophagy

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047436

Ceramide 1-phosphate/ceramide, a switch between life and death.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047436

VANTED: a system for advanced data analysis and visualization in the context of biological networks

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047436

The coordination of prostaglandin E2 production by sphingosine-1-phosphate and ceramide-1-phosphate

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047436

A comprehensive classification system for lipids

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047436

Simulation and validation of modelled sphingolipid metabolism in Saccharomyces cerevisiae

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047436

Analysis of nonvolatile lipids by mass spectrometry

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047436

Characterization of serine palmitoyltransferase activity in Chinese hamster ovary cells

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047436

Sphingolipid biosynthesis by rat liver cells: effects of serine, fatty acids and lipoproteins

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047436

(Glyco)sphingolipidology: an amazing challenge and opportunity for systems biology

4 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1752-0509-5-26

Profiling of eicosanoid production in the rat hippocampus during kainic acid-induced seizure: dual phase regulation and differential involvement of COX-1 and COX-2.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1752-0509-5-26

Ceramide kinase deficiency impairs microendothelial cell angiogenesis in vitro

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1752-0509-5-26

Computationally predicting rate constants in pathway models.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047436

Dynamic pathway modeling of sphingolipid metabolism

30 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21303545

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Kinetics of long-chain (sphingoid) base biosynthesis in intact LM cells: effects of varying the extracellular concentrations of serine and fatty acid precursors of this pathway

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21303545

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1752-0509-5-26

1 reference

journals/bmcsb/GuptaMMGS11

29 July 2017

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

29 July 2017

1 reference