Dynamics of haplotype frequency change in a CD8+TL epitope of simian immunodeficiency virus (Q33824415)

29 July 2017

Dynamics of haplotype frequency change in a CD8+TL epitope of simian immunodeficiency virus (English)

1 reference

Simian immunodeficiency virus

29 July 2017

0 references

David O'Connor

6

0 references

Dawn M Dudley

series ordinal

3

object named as

Dawn M Dudley

1 reference

29 July 2017

1

Austin L Hughes

1 reference

29 July 2017

Shelby O'Connor

2

1 reference

PubMed ID

20149896

29 July 2017

Benjamin J Burwitz

series ordinal

4

1 reference

PubMed ID

20149896

29 July 2017

Benjamin N Bimber

series ordinal

5

1 reference

29 July 2017

10 February 2010

1 reference

Infection, Genetics and Evolution

29 July 2017

1 reference

29 July 2017

10

1 reference

29 July 2017

4

1 reference

29 July 2017

555-560

1 reference

Ultradeep pyrosequencing detects complex patterns of CD8+ T-lymphocyte escape in simian immunodeficiency virus-infected macaques

29 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2863052

The first T cell response to transmitted/founder virus contributes to the control of acute viremia in HIV-1 infection

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2863052

Identification and characterization of transmitted and early founder virus envelopes in primary HIV-1 infection

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2863052

Compensatory substitutions restore normal core assembly in simian immunodeficiency virus isolates with Gag epitope cytotoxic T-lymphocyte escape mutations

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2863052

A dominant role for CD8+-T-lymphocyte selection in simian immunodeficiency virus sequence variation

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2863052

Fitness costs limit viral escape from cytotoxic T lymphocytes at a structurally constrained epitope

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2863052

Extraepitopic compensatory substitutions partially restore fitness to simian immunodeficiency virus variants that escape from an immunodominant cytotoxic-T-lymphocyte response

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2863052

Simultaneous positive and purifying selection on overlapping reading frames of the tat and vpr genes of simian immunodeficiency virus.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2863052

Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2863052

Virus-specific cytotoxic T-lymphocyte responses select for amino-acid variation in simian immunodeficiency virus Env and Nef.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2863052

Different trajectories of parallel evolution during viral adaptation

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2863052

Unbiased estimation of the rates of synonymous and nonsynonymous substitution

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2863052

Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2863052

Rates and dates of divergence between AIDS virus nucleotide sequences

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2863052

Within-host evolution of CD8+-TL epitopes encoded by overlapping and non-overlapping reading frames of simian immunodeficiency virus

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2863052

Infrequent transmission of HIV-1 drug-resistant variants.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2863052

Genetic and phylogenetic analyses of HIV-1 corroborate the transmission link hypothesis.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2863052

Acute phase cytotoxic T lymphocyte escape is a hallmark of simian immunodeficiency virus infection

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2863052

Tat-specific cytotoxic T lymphocytes select for SIV escape variants during resolution of primary viraemia

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2863052

Phylogenetic Investigation of Transmission Pathways of Drug-Resistant HIV-1 Utilizing Pol Sequences Derived From Resistance Genotyping

29 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20149896

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Quantifying the uncertainty in forecasts of anthropogenic climate change

1 reference

27 September 2022

https://opencitations.net/index/coci/api/v1/citations/10.1038/35036559

Identifiers

DOI

10.1016/J.MEEGID.2010.02.001

1 reference

29 July 2017

1 reference

29 July 2017

1 reference

PubMed ID

20149896