Evolutionary study of the isoflavonoid pathway based on multiple copies analysis in soybean (Q33825024)

29 July 2017

title

Evolutionary study of the isoflavonoid pathway based on multiple copies analysis in soybean (English)

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29 July 2017

Shanshan Chu

1

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29 July 2017

Jiao Wang

2

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29 July 2017

Hao Cheng

3

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29 July 2017

Qing Yang

4

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29 July 2017

Deyue Yu

5

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29 July 2017

publication date

24 June 2014

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29 July 2017

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29 July 2017

volume

15

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29 July 2017

page(s)

76

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Diversifying selection on flavanone 3-hydroxylase and isoflavone synthase genes in cultivated soybean and its wild progenitors

29 July 2017

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4 July 2018

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Resequencing of 31 wild and cultivated soybean genomes identifies patterns of genetic diversity and selection

4 July 2018

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Structure, function, and engineering of enzymes in isoflavonoid biosynthesis

4 July 2018

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Molecular Evolution of the Endosperm Starch Synthesis Pathway Genes in Rice (Oryza sativa L.) and Its Wild Ancestor, O. rufipogon L

4 July 2018

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4 July 2018

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Dating the origins of polyploidy events

4 July 2018

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The evolution of control and distribution of adaptive mutations in a metabolic pathway

4 July 2018

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Evolutionary rate patterns of the Gibberellin pathway genes

4 July 2018

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4 July 2018

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Plants with double genomes might have had a better chance to survive the Cretaceous-Tertiary extinction event

4 July 2018

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Multilocus analysis of variation using a large empirical data set: phenylpropanoid pathway genes in Arabidopsis thaliana

4 July 2018

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4 July 2018

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4 July 2018

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Functional analysis of members of the isoflavone and isoflavanone O-methyltransferase enzyme families from the model legume Medicago truncatula.

4 July 2018

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4 July 2018

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Influence of metabolic network structure and function on enzyme evolution

4 July 2018

1 reference

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Paleopolyploidy and gene duplication in soybean and other legumes

4 July 2018

1 reference

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Highly syntenic regions in the genomes of soybean, Medicago truncatula, and Arabidopsis thaliana

4 July 2018

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Evolutionary rates analysis of Leguminosae implicates a rapid diversification of lineages during the tertiary

4 July 2018

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The evolutionary dynamics of plant duplicate genes

4 July 2018

1 reference

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Evolving protein functional diversity in new genes of Drosophila

4 July 2018

1 reference

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Functional divergence of duplicated genes formed by polyploidy during Arabidopsis evolution

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076065

The evolution of molecular genetic pathways and networks

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076065

Genetic diversity and selection in the maize starch pathway

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076065

Selection in the evolution of gene duplications

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076065

Positive selection of a gene family during the emergence of humans and African apes

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076065

Flavonoid biosynthesis. A colorful model for genetics, biochemistry, cell biology, and biotechnology

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076065

The evolutionary fate and consequences of duplicate genes

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076065

Identification and expression of isoflavone synthase, the key enzyme for biosynthesis of isoflavones in legumes

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076065

Genome duplication in soybean (Glycine subgenus soja).

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076065

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076065

The evolution of genes in branched metabolic pathways

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076065

Molecular and chromosomal evidence for allopolyploidy in soybean

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076065

The correlation of evolutionary rate with pathway position in plant terpenoid biosynthesis

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076065

Synteny and Collinearity in Plant Genomes

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076065

Adaptive evolution of metabolic pathways in Drosophila.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076065

Placing paleopolyploidy in relation to taxon divergence: a phylogenetic analysis in legumes using 39 gene families

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076065

Partial reconstruction of flavonoid and isoflavonoid biosynthesis in yeast using soybean type I and type II chalcone isomerases

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076065

Mining EST databases to resolve evolutionary events in major crop species

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076065

Comparative physical mapping reveals features of microsynteny between Glycine max, Medicago truncatula, and Arabidopsis thaliana

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076065

Evolutionary rate variation in anthocyanin pathway genes

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076065

Divergent members of a soybean (Glycine max L.) 4-coumarate:coenzyme A ligase gene family

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076065

Patterns of evolutionary rate variation among genes of the anthocyanin biosynthetic pathway

29 October 2018

1 reference

12 December 2020

Positive selection within sperm-egg adhesion domains of fertilin: an ADAM gene with a potential role in fertilization

1 reference

12 December 2020

Transcriptome analysis reveals a critical role of CHS7 and CHS8 genes for isoflavonoid synthesis in soybean seeds

1 reference

12 December 2020

Variation in constraint versus positive selection as an explanation for evolutionary rate variation among anthocyanin genes

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2156-15-76

1 reference

Dimensions Publication ID

29 July 2017

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2156-15-76

9 September 2019

1 reference

29 July 2017

1 reference