Protein secondary structure prediction with a neural network (Q33828425)

29 July 2017

Protein secondary structure prediction with a neural network (English)

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protein structure prediction

29 July 2017

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Karplus M

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29 July 2017

Holley LH

1

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PubMed ID

2911565

29 July 2017

language of work or name

English

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publication date

1 January 1989

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29 July 2017

5

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Proceedings of the National Academy of Sciences of the United States of America

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published in

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29 July 2017

86

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29 July 2017

152-156

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29 July 2017

1

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PubMed ID

2911565

describes a project that uses

29 July 2017

artificial neural network

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Neural networks and physical systems with emergent collective computational abilities

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cites work

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=286422

How good are predictions of protein secondary structure?

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=286422

Prediction of protein conformation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=286422

Computing with neural circuits: a model

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=286422

An algorithm for secondary structure determination in proteins based on sequence similarity

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=286422

Prediction of protein secondary structure and active sites using the alignment of homologous sequences

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=286422

Prediction of secondary structure by evolutionary comparison: application to the alpha subunit of tryptophan synthase

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=286422

A critical evaluation of methods for prediction of protein secondary structures

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=286422

Predicting the secondary structure of globular proteins using neural network models

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=286422

Potent vasodilator activity of calcitonin gene-related peptide in human skin

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=286422

Comparison of the predicted and observed secondary structure of T4 phage lysozyme

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=286422

Assessment of some problems associated with prediction of the three-dimensional structure of a protein from its amino-acid sequence

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=286422

An assessment of protein secondary structure prediction methods based on amino acid sequence

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=286422

The Protein Data Bank: a computer-based archival file for macromolecular structures

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=286422

Triplet information in helix prediction applied to the analysis of super-secondary structures

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=286422

Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=286422

Improvements in the prediction of protein backbone topography by reduction of statistical errors

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=286422

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=286422

Tests of the helix dipole model for stabilization of α-helices

29 October 2018

1 reference

12 December 2020

Turn prediction in proteins using a pattern-matching approach

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12 December 2020

Further developments of protein secondary structure prediction using information theory. New parameters and consideration of residue pairs

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12 December 2020

Amino acid sequence homology applied to the prediction of protein secondary structures, and joint prediction with existing methods

1 reference

12 December 2020

An attempt to evaluate the influence of neighboring amino acids (n-1) and (n+1) on the backbone conformation of amino acid (n) in proteins. Use in predicting the three-dimensional structure of the polypeptide backbone of other proteins

1 reference

12 December 2020

Algorithms for prediction of alpha-helical and beta-structural regions in globular proteins

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12 December 2020

Identifiers

DOI

10.1073/PNAS.86.1.152

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29 July 2017

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29 July 2017

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PubMed ID

2911565