Viral linkage in HIV-1 seroconverters and their partners in an HIV-1 prevention clinical trial (Q33844706)

29 July 2017

Viral linkage in HIV-1 seroconverters and their partners in an HIV-1 prevention clinical trial (English)

1 reference

29 July 2017

0 references

prevention of HIV/AIDS

0 references

4

Connie Celum

1 reference

Partners in Prevention HSV/HIV Transmission Study Team

29 July 2017

20

object named as

Partners in Prevention HSV/HIV Transmission Study Team

1 reference

29 July 2017

18

Lawrence Corey

1 reference

29 July 2017

Anna Wald

17

0 references

Thomas Leitner

16

object named as

Thomas Leitner

1 reference

29 July 2017

14

Francine E McCutchan

1 reference

29 July 2017

15

Jan Albert

1 reference

29 July 2017

2

James I Mullins

1 reference

29 July 2017

13

Jared M Baeten

1 reference

29 July 2017

19

Jairam R Lingappa

1 reference

29 July 2017

11

Erin Kahle

1 reference

29 July 2017

6

Dana N Raugi

1 reference

29 July 2017

8

Julia N Stoddard

1 reference

29 July 2017

12

Dana Panteleeff

1 reference

29 July 2017

Mary S Campbell

1

1 reference

29 July 2017

James P Hughes

3

1 reference

29 July 2017

Kim G Wong

5

1 reference

29 July 2017

Stefanie Sorensen

7

1 reference

29 July 2017

Hong Zhao

9

1 reference

29 July 2017

Wenjie Deng

10

1 reference

29 July 2017

language of work or name

English

0 references

publication date

2 March 2011

1 reference

29 July 2017

1 reference

29 July 2017

6

1 reference

29 July 2017

3

1 reference

29 July 2017

e16986

1 reference

Creative Commons Attribution 4.0 International

29 July 2017

start time

2 March 2011

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

Bayes' theorem

1 reference

18 June 2022

https://europepmc.org/article/PMC/3047537

based on heuristic

inferred from PubMed Central ID database lookup

cites work

Transmission of single HIV-1 genomes and dynamics of early immune escape revealed by ultra-deep sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

DIVEIN: a web server to analyze phylogenies, sequence divergence, diversity, and informative sites

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

Acyclovir and transmission of HIV-1 from persons infected with HIV-1 and HSV-2.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

Compartmentalization of HIV-1 within the female genital tract is due to monotypic and low-diversity variants not distinct viral populations

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

Genetic identity, biological phenotype, and evolutionary pathways of transmitted/founder viruses in acute and early HIV-1 infection

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

Tracing the HIV-1 subtype B mobility in Europe: a phylogeographic approach

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

Characteristics of HIV-1 discordant couples enrolled in a trial of HSV-2 suppression to reduce HIV-1 transmission: the partners study

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

Monotypic human immunodeficiency virus type 1 genotypes across the uterine cervix and in blood suggest proliferation of cells with provirus

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

Quantitating the multiplicity of infection with human immunodeficiency virus type 1 subtype C reveals a non-poisson distribution of transmitted variants

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

Inflammatory genital infections mitigate a severe genetic bottleneck in heterosexual transmission of subtype A and C HIV-1

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

Selection of HIV variants with signature genotypic characteristics during heterosexual transmission

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

Human immunodeficiency virus type 1 population genetics and adaptation in newly infected individuals.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

Rethinking the heterosexual infectivity of HIV-1: a systematic review and meta-analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

Identification and characterization of transmitted and early founder virus envelopes in primary HIV-1 infection

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

HIV-1 variation before seroconversion in men who have sex with men: analysis of acute/early HIV infection in the multicenter AIDS cohort study

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

Episodic sexual transmission of HIV revealed by molecular phylodynamics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

Deciphering human immunodeficiency virus type 1 transmission and early envelope diversification by single-genome amplification and sequencing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

Regional differences in prevalence of HIV-1 discordance in Africa and enrollment of HIV-1 discordant couples into an HIV-1 prevention trial

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

ViroBLAST: a stand-alone BLAST web server for flexible queries of multiple databases and user's datasets

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

Neutralization escape variants of human immunodeficiency virus type 1 are transmitted from mother to infant

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

Semen-specific genetic characteristics of human immunodeficiency virus type 1 env.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

MUSCLE: a multiple sequence alignment method with reduced time and space complexity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

Molecular epidemiology of human immunodeficiency virus type 1 transmission in a heterosexual cohort of discordant couples in Zambia

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

Consistent viral evolutionary changes associated with the progression of human immunodeficiency virus type 1 infection

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

Characterization of mother-infant HIV type 1 gag p17 sequences associated with perinatal transmission

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

Accurate reconstruction of a known HIV-1 transmission history by phylogenetic tree analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

Molecular epidemiology of HIV transmission in a dental practice

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

Adaptive evolution of human immunodeficiency virus-type 1 during the natural course of infection

5 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0016986

Molecular investigation of human immunodeficiency virus (HIV) infection in a patient of an HIV-infected surgeon

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0016986

Sequence data as evidence

21 January 2018

2 references

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0016986

21 January 2018

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3047537

Quantitation of target molecules from polymerase chain reaction-based limiting dilution assays.

29 October 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0016986

Evolution of human immunodeficiency virus type 1 envelope sequences in infected individuals with differing disease progression profiles.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0016986

Envelope-constrained neutralization-sensitive HIV-1 after heterosexual transmission.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0016986

HIV Quasispecies and Resampling

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0016986

Forensic evidence by DNA sequencing

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21399681

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Concordance between HIV source partner identification and molecular confirmation in acute retroviral syndrome

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21399681

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0016986

1 reference

29 July 2017

0 references

1 reference

29 July 2017

1 reference