iDynoMiCS: next-generation individual-based modelling of biofilms (Q33848394)

29 July 2017

iDynoMiCS: next-generation individual-based modelling of biofilms (English)

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29 July 2017

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Andreas Dötsch

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Jan-Ulrich Kreft

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Jan-Ulrich Kreft

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Barth F Smets

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Barth F Smets

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author name string

Laurent A Lardon

1

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29 July 2017

Brian V Merkey

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29 July 2017

Sónia Martins

3

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29 July 2017

Cristian Picioreanu

5

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29 July 2017

16 March 2011

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Environmental Microbiology

29 July 2017

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29 July 2017

13

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9

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29 July 2017

2416-2434

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A multidimensional multispecies continuum model for heterogeneous biofilm development.

29 July 2017

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

Three-dimensional biofilm model with individual cells and continuum EPS matrix.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

Long-term monitoring of bacteria undergoing programmed population control in a microchemostat

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

Dynamics of denitrification activity of Paracoccus denitrificans in continuous culture during aerobic-anaerobic changes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

Self-generated diversity produces "insurance effects" in biofilm communities

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

Effect of oxygen gradients on the activity and microbial community structure of a nitrifying, membrane-aerated biofilm

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

A two-dimensional continuum model of biofilm growth incorporating fluid flow and shear stress based detachment.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

Smoothed particle hydrodynamics: theory and application to non-spherical stars

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

A standard protocol for describing individual-based and agent-based models

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

Stochasticity in gene expression: from theories to phenotypes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

Biofilms promote altruism

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

BacSim, a simulator for individual-based modelling of bacterial colony growth.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

Individual-based modelling of biofilms.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

Evaluating trends in biofilm density using the UMCCA model

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

Modeling the development of biofilm density including active bacteria, inert biomass, and extracellular polymeric substances

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

Optical sectioning of microbial biofilms

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

Bacteria can form interconnected microcolonies when a self-excreted product reduces their surface motility: evidence from individual-based model simulations

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

Microbial community structure in autotrophic nitrifying granules characterized by experimental and simulation analyses

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

Modeling how soluble microbial products (SMP) support heterotrophic bacteria in autotroph-based biofilms.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

Growth dependence of conjugation explains limited plasmid invasion in biofilms: an individual-based modelling study

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

The sociobiology of biofilms.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

Particle-based multidimensional multispecies biofilm model

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

Aerobic denitrification--old wine in new bottles?

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

21 January 2018

Diffusion in biofilms

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

Physiological heterogeneity in biofilms

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

Biofilms as complex differentiated communities

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

A multispecies biofilm model.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

Mathematical modeling of mixed-culture biofilms.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

Biofilm, city of microbes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

Cooperation and conflict in microbial biofilms.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

A framework for multidimensional modelling of activity and structure of multispecies biofilms.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

A general description of detachment for multidimensional modelling of biofilms.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

Biofilm-control strategies based on enzymic disruption of the extracellular polymeric substance matrix--a modelling study.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

Multi-scale individual-based model of microbial and bioconversion dynamics in aerobic granular sludge

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

Anaerobic activation of the entire denitrification pathway in Pseudomonas aeruginosa requires Anr, an analog of Fnr

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02414.X

Experimental reproducibility in flow-chamber biofilms

21 January 2018

1 reference

24 May 2022

https://opencitations.net/index/coci/api/v1/citations/10.1099/00221287-146-10-2409

Identifiers

DOI

10.1111/J.1462-2920.2011.02414.X

1 reference

29 July 2017

1 reference