Comparative analysis of more than 3000 sequences reveals the existence of two pseudoknots in area V4 of eukaryotic small subunit ribosomal RNA. (Q33855527)

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English	Comparative analysis of more than 3000 sequences reveals the existence of two pseudoknots in area V4 of eukaryotic small subunit ribosomal RNA.	scientific article

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scholarly article

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Europe PubMed Central

29 July 2017

Comparative analysis of more than 3000 sequences reveals the existence of two pseudoknots in area V4 of eukaryotic small subunit ribosomal RNA. (English)

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Europe PubMed Central

29 July 2017

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author name string

J Wuyts

1

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Europe PubMed Central

29 July 2017

P De Rijk

2

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Europe PubMed Central

29 July 2017

Y Van de Peer

3

1 reference

Europe PubMed Central

29 July 2017

G Pison

4

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Europe PubMed Central

29 July 2017

P Rousseeuw

5

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Europe PubMed Central

29 July 2017

R De Wachter

6

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Europe PubMed Central

29 July 2017

language of work or name

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publication date

1 December 2000

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Europe PubMed Central

29 July 2017

Nucleic Acids Research

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29 July 2017

28

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Europe PubMed Central

29 July 2017

23

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Europe PubMed Central

29 July 2017

4698-4708

1 reference

Europe PubMed Central

29 July 2017

PseudoBase: a database with RNA pseudoknots

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=115172

28 July 2018

The European small subunit ribosomal RNA database

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28 July 2018

X-ray crystal structures of 70S ribosome functional complexes

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Placement of protein and RNA structures into a 5 A-resolution map of the 50S ribosomal subunit

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28 July 2018

Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution

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28 July 2018

Construction of a variability map for eukaryotic large subunit ribosomal RNA.

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28 July 2018

Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure

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Modelling the secondary structures of slippage-prone hypervariable RNA regions: the example of the tiger beetle 18S rRNA variable region V4.

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Evolutionary relationships among the eukaryotic crown taxa taking into account site-to-site rate variation in 18S rRNA.

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28 July 2018

A new model for the three-dimensional folding of Escherichia coli 16 S ribosomal RNA. I. Fitting the RNA to a 3D electron microscopic map at 20 A.

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28 July 2018

Inferring the conformation of RNA base pairs and triples from patterns of sequence variation

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28 July 2018

Secondary structure of the small subunit ribosomal RNA sequence of the microsporidium Encephalitozoon cuniculi

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A compilation of large subunit (23S and 23S-like) ribosomal RNA structures: 1993

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28 July 2018

The complete nucleotide sequence of mouse 28S rRNA gene. Implications for the process of size increase of the large subunit rRNA In higher eukaryotes

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Comparative anatomy of 16-S-like ribosomal RNA.

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28 July 2018

Bacterial evolution

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28 July 2018

A proposal for the secondary structure of a variable area of eukaryotic small ribosomal subunit RNA involving the existence of a pseudoknot

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Identifying constraints on the higher-order structure of RNA: continued development and application of comparative sequence analysis methods

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28 July 2018

Compilation of small ribosomal subunit RNA sequences

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28 July 2018

Evolution of Hypervariable Regions, V4 and V7, of Insect 18S rRNA and Their Phylogenetic Implications.

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29 October 2018

The origin and evolution of variable-region helices in V4 and V7 of the small-subunit ribosomal RNA of branchiopod crustaceans.

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A quantitative map of nucleotide substitution rates in bacterial rRNA.

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29 October 2018

Lessons from an evolving rRNA: 16S and 23S rRNA structures from a comparative perspective.

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29 October 2018

DCSE, an interactive tool for sequence alignment and secondary structure research

1 reference

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The European large subunit ribosomal RNA database

1 reference

https://pubmed.ncbi.nlm.nih.gov/11095680

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Compilation of small ribosomal subunit RNA sequences

1 reference

https://pubmed.ncbi.nlm.nih.gov/11095680

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Database on the structure of large ribosomal subunit RNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/11095680

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Database on the structure of small ribosomal subunit RNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/11095680

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/28.23.4698

1 reference

Europe PubMed Central

29 July 2017

1 reference

Europe PubMed Central

29 July 2017

1 reference

Europe PubMed Central

29 July 2017

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