Elimination of foreign DNA during somatic differentiation in Tetrahymena thermophila shows position effect and is dosage dependent (Q33860134)

29 July 2017

title

Elimination of foreign DNA during somatic differentiation in Tetrahymena thermophila shows position effect and is dosage dependent (English)

1 reference

29 July 2017

main subject

Tetrahymena thermophila

1 reference

3

Martin A Gorovsky

1 reference

29 July 2017

Yifan Liu

1

1 reference

29 July 2017

Xiaoyuan Song

series ordinal

2

1 reference

29 July 2017

Kathleen M Karrer

series ordinal

4

1 reference

29 July 2017

publication date

1 February 2005

1 reference

29 July 2017

1 reference

29 July 2017

volume

4

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29 July 2017

issue

2

1 reference

29 July 2017

page(s)

421-431

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Conjugation-specific small RNAs in Tetrahymena have predicted properties of scan (scn) RNAs involved in genome rearrangement

29 July 2017

cites work

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Small RNAs in genome rearrangement in Tetrahymena.

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The RNA-dependent RNA polymerase, QDE-1, is a rate-limiting factor in post-transcriptional gene silencing in Neurospora crassa

5 July 2018

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Histone H3 lysine 9 methylation is required for DNA elimination in developing macronuclei in Tetrahymena.

5 July 2018

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Heterochromatic silencing and HP1 localization in Drosophila are dependent on the RNAi machinery

5 July 2018

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RNAi-mediated targeting of heterochromatin by the RITS complex

5 July 2018

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The crystal structure of the Argonaute2 PAZ domain reveals an RNA binding motif in RNAi effector complexes

5 July 2018

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Structure and conserved RNA binding of the PAZ domain

5 July 2018

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Structure and nucleic-acid binding of the Drosophila Argonaute 2 PAZ domain

5 July 2018

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Diverse sequences within Tlr elements target programmed DNA elimination in Tetrahymena thermophila

5 July 2018

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ARGONAUTE4 control of locus-specific siRNA accumulation and DNA and histone methylation

5 July 2018

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The genetics of RNA silencing

5 July 2018

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The Argonaute family: tentacles that reach into RNAi, developmental control, stem cell maintenance, and tumorigenesis

5 July 2018

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Histone methyltransferase activity of a Drosophila Polycomb group repressor complex

5 July 2018

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Drosophila enhancer of Zeste/ESC complexes have a histone H3 methyltransferase activity that marks chromosomal Polycomb sites

5 July 2018

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Introduction of a Chimeric Chalcone Synthase Gene into Petunia Results in Reversible Co-Suppression of Homologous Genes in trans

5 July 2018

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Methylation of histone h3 at lysine 9 targets programmed DNA elimination in tetrahymena

5 July 2018

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Analysis of a piwi-related gene implicates small RNAs in genome rearrangement in tetrahymena

5 July 2018

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Coordinated methyl and RNA binding is required for heterochromatin localization of mammalian HP1alpha

5 July 2018

1 reference

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Small RNAs correspond to centromere heterochromatic repeats

5 July 2018

1 reference

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Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi

5 July 2018

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The insulation of genes from external enhancers and silencing chromatin

5 July 2018

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Genome remodeling in ciliated protozoa.

5 July 2018

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A novel family of mobile genetic elements is limited to the germline genome in Tetrahymena thermophila

5 July 2018

1 reference

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RNA-dependent RNA polymerases, viruses, and RNA silencing

5 July 2018

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RNA silencing: the genome's immune system

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

A robust inducible-repressible promoter greatly facilitates gene knockouts, conditional expression, and overexpression of homologous and heterologous genes in Tetrahymena thermophila

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

On the role of RNA amplification in dsRNA-triggered gene silencing

5 July 2018

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Nongenic, bidirectional transcription precedes and may promote developmental DNA deletion in Tetrahymena thermophila

5 July 2018

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Role of histone H3 lysine 9 methylation in epigenetic control of heterochromatin assembly

5 July 2018

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Selective recognition of methylated lysine 9 on histone H3 by the HP1 chromo domain

5 July 2018

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Methylation of histone H3 lysine 9 creates a binding site for HP1 proteins

5 July 2018

1 reference

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Cis-acting requirements in flanking DNA for the programmed elimination of mse2.9: a common mechanism for deletion of internal eliminated sequences from the developing macronucleus of Tetrahymena thermophila

5 July 2018

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Making noise about silence: repression of repeated genes in animals

5 July 2018

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Methylation-induced repression--belts, braces, and chromatin

5 July 2018

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Mut-7 of C. elegans, required for transposon silencing and RNA interference, is a homolog of Werner syndrome helicase and RNaseD.

5 July 2018

1 reference

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The rde-1 gene, RNA interference, and transposon silencing in C. elegans

5 July 2018

1 reference

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Epigenetics: regulation through repression

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

Kinesin-II is preferentially targeted to assembling cilia and is required for ciliogenesis and normal cytokinesis in Tetrahymena

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

Tetrahymena genetics: two nuclei are better than one.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

Flanking regulatory sequences of the Tetrahymena R deletion element determine the boundaries of DNA rearrangement

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

Copy number control of a transposable element, the I factor, a LINE-like element in Drosophila.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

The Drosophila Polycomb Group proteins ESC and E(Z) bind directly to each other and co-localize at multiple chromosomal sites.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

Chromatin silencing and the maintenance of a functional germline in Caenorhabditis elegans

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

A developmentally eliminated sequence in the flanking region of the histone H1 gene in Tetrahymena thermophila contains short repeats

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

Constitutive expression, not a particular primary sequence, is the important feature of the H3 replacement variant hv2 in Tetrahymena thermophila

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

Epigenetic phenomena in filamentous fungi: useful paradigms or repeat-induced confusion?

5 July 2018

1 reference

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Germline and somatic transformation of mating Tetrahymena thermophila by particle bombardment

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

Germ-line knockout heterokaryons of an essential alpha-tubulin gene enable high-frequency gene replacement and a test of gene transfer from somatic to germ-line nuclei in Tetrahymena thermophila

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

Genome downsizing during ciliate development: nuclear division of labor through chromosome restructuring

5 July 2018

1 reference

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Developmentally programmed DNA rearrangement in Tetrahymena thermophila: isolation and sequence characterization of three new alternative deletion systems

5 July 2018

1 reference

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Pdd1p, a novel chromodomain-containing protein, links heterochromatin assembly and DNA elimination in Tetrahymena

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

Epigenetic programming of developmental genome rearrangements in ciliates.

5 July 2018

1 reference

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Programmed DNA deletions in Tetrahymena: mechanisms and implications

5 July 2018

1 reference

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Non-Mendelian, heritable blocks to DNA rearrangement are induced by loading the somatic nucleus of Tetrahymena thermophila with germ line-limited DNA.

5 July 2018

1 reference

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Transformation of Tetrahymena thermophila by microinjection of a foreign gene

5 July 2018

1 reference

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High frequency vector-mediated transformation and gene replacement in Tetrahymena

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

Linker histones are not essential and affect chromatin condensation in vivo

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

Germ line-specific DNA sequences are present on all five micronuclear chromosomes in Tetrahymena thermophila

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

Cloning of abundant mRNA species present during conjugation of Tetrahymena thermophila: identification of mRNA species present exclusively during meiosis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

Histone content of chromosomal loci active and inactive in RNA synthesis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

Studies on nuclear structure and function in Tetrahymena pyriformis. II. Isolation of macro- and micronuclei

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

Cytologic and autoradiographic studies of the micronucleus at meiotic prophase in Tetrahymena pyriformis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

Adolescence in Tetrahymena thermophila

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

Sequence structures of two developmentally regulated, alternative DNA deletion junctions in Tetrahymena thermophila

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

Nucleotide sequence structure and consistency of a developmentally regulated DNA deletion in Tetrahymena thermophila

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

Reproducible and variable genomic rearrangements occur in the developing somatic nucleus of the ciliate Tetrahymena thermophila

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

The internally located telomeric sequences in the germ-line chromosomes of Tetrahymena are at the ends of transposon-like elements

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

RNA and protein synthesis during meiotic prophase in Tetrahymena thermophila

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

A programmed site-specific DNA rearrangement in Tetrahymena thermophila requires flanking polypurine tracts

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

Quelling: transient inactivation of gene expression in Neurospora crassa by transformation with homologous sequences

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

Macronuclear genetics of Tetrahymena. I. Random distribution of macronuclear genecopies in T. pyriformis, syngen 1

5 July 2018

1 reference

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Programmed DNA deletion as an RNA-guided system of genome defense.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

Establishment and maintenance of a heterochromatin domain

29 October 2018

1 reference

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29 October 2018

1 reference

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Higher-order structure in pericentric heterochromatin involves a distinct pattern of histone modification and an RNA component

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

Parental expression of the chromodomain protein Pdd1p is required for completion of programmed DNA elimination and nuclear differentiation.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

Taming of transposable elements by homology-dependent gene silencing.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549336

Molecular biology. An RNA-guided pathway for the epigenome

29 October 2018

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12 December 2020

A chromosome RNAissance

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12 December 2020

Flavonoid genes in petunia: addition of a limited number of gene copies may lead to a suppression of gene expression

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12 December 2020

Comparison of the sequences of macro- and micronuclear DNA of Tetrahymena pyriformis

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12 December 2020

Alternate junctions and microheterogeneity of Tlr1, a developmentally regulated DNA rearrangement in Tetrahymena thermophila

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12 December 2020

A distant 10-bp sequence specifies the boundaries of a programmed DNA deletion in Tetrahymena

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12 December 2020

Isolation of micro- and macronuclei of Tetrahymena pyriformis

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12 December 2020

Homology-based control of gene expression patterns in transgenic petunia flowers

1 reference

12 December 2020

10.1128/EC.4.2.421-431.2005

Identifiers

DOI

1 reference

29 July 2017

1 reference

29 July 2017

1 reference