FusionMap: detecting fusion genes from next-generation sequencing data at base-pair resolution (Q33905061)

29 July 2017

FusionMap: detecting fusion genes from next-generation sequencing data at base-pair resolution (English)

1 reference

29 July 2017

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Wolfgang Hoeck

6

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author name string

Huanying Ge

1

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29 July 2017

Kejun Liu

2

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29 July 2017

Todd Juan

3

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29 July 2017

Fang Fang

4

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29 July 2017

Matthew Newman

5

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29 July 2017

language of work or name

English

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publication date

18 May 2011

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29 July 2017

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29 July 2017

27

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29 July 2017

14

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29 July 2017

1922-1928

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Detection of splice junctions from paired-end RNA-seq data by SpliceMap.

29 July 2017

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR310

Integrative analysis of the melanoma transcriptome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR310

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR310

Identification of somatically acquired rearrangements in cancer using genome-wide massively parallel paired-end sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR310

A sequence-level map of chromosomal breakpoints in the MCF-7 breast cancer cell line yields insights into the evolution of a cancer genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR310

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR310

Targeted next-generation sequencing of a cancer transcriptome enhances detection of sequence variants and novel fusion transcripts

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR310

Tyrosine kinase activity and transformation potency of bcr-abl oncogene products.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR310

Transcriptome sequencing to detect gene fusions in cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR310

Chimeric transcript discovery by paired-end transcriptome sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR310

High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR310

Molecular biology of bcr-abl1-positive chronic myeloid leukemia

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR310

Commonality but diversity in cancer gene fusions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR310

ENCODE whole-genome data in the UCSC genome browser (2011 update)

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR310

Global variation in copy number in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR310

FusionSeq: a modular framework for finding gene fusions by analyzing Paired-End RNA-Sequencing data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR310

Detection of DNA fusion junctions for BCR-ABL translocations by Anchored ChromPET

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR310

BioMart--biological queries made easy

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR310

Recurrent fusion of TMPRSS2 and ETS transcription factor genes in prostate cancer.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR310

TopHat: discovering splice junctions with RNA-Seq

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR310

MapSplice: accurate mapping of RNA-seq reads for splice junction discovery.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR310

Fast and SNP-tolerant detection of complex variants and splicing in short reads

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR310

10.1093/BIOINFORMATICS/BTR310

21 January 2018

Identifiers

DOI

1 reference

journals/bioinformatics/GeLJFNH11

29 July 2017

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DBLP Dataset 2021-01-02

28 January 2021

1 reference