Design and analysis of synthetic carbon fixation pathways (Q33928433)

30 July 2017

Design and analysis of synthetic carbon fixation pathways (English)

1 reference

30 July 2017

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3

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30 July 2017

4

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30 July 2017

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Arren Bar-Even

1

1 reference

PubMed ID

20410460

30 July 2017

Elad Noor

series ordinal

2

1 reference

PubMed ID

20410460

30 July 2017

language of work or name

English

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publication date

21 April 2010

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Proceedings of the National Academy of Sciences of the United States of America

30 July 2017

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30 July 2017

107

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30 July 2017

19

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30 July 2017

8889-8894

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Cross-species analysis traces adaptation of Rubisco toward optimality in a low-dimensional landscape

30 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

Metabolic network analysis integrated with transcript verification for sequenced genomes.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

Use of randomized sampling for analysis of metabolic networks

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

Acetogenesis and the Wood-Ljungdahl pathway of CO(2) fixation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

A dicarboxylate/4-hydroxybutyrate autotrophic carbon assimilation cycle in the hyperthermophilic Archaeum Ignicoccus hospitalis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

A 3-hydroxypropionate/4-hydroxybutyrate autotrophic carbon dioxide assimilation pathway in Archaea

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

Widespread positive selection in the photosynthetic Rubisco enzyme

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

Chloroplastic photorespiratory bypass increases photosynthesis and biomass production in Arabidopsis thaliana.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

Transgenic approaches to manipulate the environmental responses of the C3 carbon fixation cycle

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

Malonyl-coenzyme A reductase in the modified 3-hydroxypropionate cycle for autotrophic carbon fixation in archaeal Metallosphaera and Sulfolobus spp

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

Iron-sulphur clusters and the problem with oxygen

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

OptStrain: a computational framework for redesign of microbial production systems.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

Comparison of network-based pathway analysis methods

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

Toward an understanding of the mechanism of nonphotochemical quenching in green plants

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

Iron and phosphorus co-limit nitrogen fixation in the eastern tropical North Atlantic.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

LACTATE METABOLISM BY PEPTOSTREPTOCOCCUS ELSDENII: EVIDENCE FOR LACTYL COENZYME A DEHYDRASE

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

Pyruvate ferredoxin oxidoreductase and its radical intermediate

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

Malonyl-coenzyme A reductase from Chloroflexus aurantiacus, a key enzyme of the 3-hydroxypropionate cycle for autotrophic CO(2) fixation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

A bicyclic autotrophic CO2 fixation pathway in Chloroflexus aurantiacus

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

Variation in the k(cat) of Rubisco in C(3) and C(4) plants and some implications for photosynthetic performance at high and low temperature

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

Signal transduction in response to excess light: getting out of the chloroplast

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

Theory for the systemic definition of metabolic pathways and their use in interpreting metabolic function from a pathway-oriented perspective

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

KEGG: kyoto encyclopedia of genes and genomes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

Detection of elementary flux modes in biochemical networks: a promising tool for pathway analysis and metabolic engineering.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

A new ferredoxin-dependent carbon reduction cycle in a photosynthetic bacterium

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

The game of the pentose phosphate cycle

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

Lactate reduction in Clostridium propionicum. Purification and properties of lactyl-CoA dehydratase

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

Mathematical analysis of enzymic reaction systems using optimization principles

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

Total cell protein concentration as an evolutionary constraint on the metabolic control distribution in cells

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

Energy conservation in chemotrophic anaerobic bacteria

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

Improvement of photosynthetic CO2 fixation at high light intensity through reduction of chlorophyll antenna size

28 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0907176107

Can improvement in photosynthesis increase crop yields?

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0907176107

Increased sedoheptulose-1,7-bisphosphatase activity in transgenic tobacco plants stimulates photosynthesis and growth from an early stage in development

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0907176107

Despite slow catalysis and confused substrate specificity, all ribulose bisphosphate carboxylases may be nearly perfectly optimized

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0907176107

Rubisco content and photosynthesis of leaves at different positions in transgenic rice with an overexpression of RBCS.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0907176107

A new method for assembling metabolic networks, with application to the Krebs citric acid cycle.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0907176107

Evolutionary optimization of metabolic pathways. Theoretical reconstruction of the stoichiometry of ATP and NADH producing systems.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0907176107

Towards an understanding of photosynthetic acclimation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0907176107

Control of Mitochondrial Function via Photosynthetic Redox Signals.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0907176107

The Nitrogen Use Efficiency of C(3) and C(4) Plants: II. Leaf Nitrogen Effects on the Gas Exchange Characteristics of Chenopodium album (L.) and Amaranthus retroflexus (L.).

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0907176107

Solute transporters as connecting elements between cytosol and plastid stroma.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0907176107

Interaction between photosynthesis and respiration in illuminated leaves.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2889323

Round and round: a guide to the carbon cycle

29 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20410460

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0907176107

1 reference

30 July 2017

0 references

1 reference

30 July 2017

1 reference

PubMed ID

20410460