Observing spontaneous branch migration of Holliday junctions one step at a time (Q33936256)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15824311%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

title

Observing spontaneous branch migration of Holliday junctions one step at a time (English)

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10 January 2020

4

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10 January 2020

2

Alasdair D J Freeman

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10 January 2020

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Sean A McKinney

1

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10 January 2020

David M J Lilley

series ordinal

3

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10 January 2020

language of work or name

English

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publication date

11 April 2005

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Proceedings of the National Academy of Sciences of the United States of America

10 January 2020

published in

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10 January 2020

volume

102

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10 January 2020

issue

16

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10 January 2020

page(s)

5715-5720

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Direct observation of RuvAB-catalyzed branch migration of single Holliday junctions.

10 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556122

Single-molecule study of RuvAB-mediated Holliday-junction migration

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556122

RuvAB-directed branch migration of individual Holliday junctions is impeded by sequence heterology.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556122

Interplay between DNA replication, recombination and repair based on the structure of RecG helicase

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556122

Conformational and hydration effects of site-selective sodium, calcium and strontium ion binding to the DNA Holliday junction structure d(TCGGTACCGA)(4)

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556122

Single-molecule fluorescence resonance energy transfer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556122

The junction-resolving enzymes.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556122

Structures of helical junctions in nucleic acids

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556122

The Holliday junction in an inverted repeat DNA sequence: sequence effects on the structure of four-way junctions

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556122

The importance of repairing stalled replication forks

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556122

Crystal structure of a DNA Holliday junction

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556122

Crystal structure of an 82-nucleotide RNA-DNA complex formed by the 10-23 DNA enzyme

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556122

Processing of recombination intermediates by the RuvABC proteins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556122

Crossover isomer bias is the primary sequence-dependent property of immobilized Holliday junctions

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556122

The kinetics of spontaneous DNA branch migration

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556122

Branch migration during homologous recombination: assembly of a RuvAB-Holliday junction complex in vitro.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556122

A pivotal role for the structure of the Holliday junction in DNA branch migration

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556122

Branch migration of three-strand recombination intermediates by RecG, a possible pathway for securing exchanges initiated by 3'-tailed duplex DNA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556122

A Holliday recombination intermediate is twofold symmetric

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556122

Geometry of a branched DNA structure in solution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556122

Using hydroxyl radical to probe DNA structure

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556122

In vitro system from Escherichia coli that catalyzes generalized genetic recombination

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=556122

A mechanism for gene conversion in fungi

5 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0409328102

Identification of double Holliday junctions as intermediates in meiotic recombination.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0409328102

Sequence dependence and direct measurement of crossover isomer distribution in model Holliday junctions using NMR spectroscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0409328102

Exchange between stacking conformers in a four-Way DNA junction.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0409328102

Structural dynamics of individual Holliday junctions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0409328102

DnaB drives DNA branch migration and dislodges proteins while encircling two DNA strands.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0409328102

Nomenclature Committee of the International Union of Biochemistry and Molecular Biology (NC-IUBMB). A nomenclature of junctions and branchpoints in nucleic acids. Recommendations 1994.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0409328102

Fluorescence energy transfer shows that the four-way DNA junction is a right-handed cross of antiparallel molecules

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0409328102

NMR study of the exchange rate between two stacked conformers of a model Holliday junction

21 January 2018

1 reference

12 December 2020

Sequence dependence of branch migratory minima

1 reference

12 December 2020

Exploring rare conformational species and ionic effects in DNA Holliday junctions using single-molecule spectroscopy

1 reference

12 December 2020

The structure of the Holliday junction, and its resolution

1 reference

12 December 2020

Symmetric Holliday junction crossover isomers

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0409328102

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15824311%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

0 references

1 reference

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10 January 2020

1 reference