Phylogenetic incongruence arising from fragmented speciation in enteric bacteria (Q33953353)

30 July 2017

title

Phylogenetic incongruence arising from fragmented speciation in enteric bacteria (English)

1 reference

30 July 2017

1 reference

1 reference

Adam C Retchless

1

1 reference

30 July 2017

Jeffrey G Lawrence

series ordinal

2

1 reference

30 July 2017

language of work or name

English

0 references

publication date

7 June 2010

1 reference

Proceedings of the National Academy of Sciences of the United States of America

30 July 2017

published in

1 reference

30 July 2017

volume

107

1 reference

30 July 2017

issue

25

1 reference

30 July 2017

page(s)

11453-11458

1 reference

Cryptic lineages of the genus Escherichia

30 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2895130

On the origin of prokaryotic species.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2895130

Epistemological impacts of horizontal gene transfer on classification in microbiology

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2895130

Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2895130

Reproductive isolation in Saccharomyces

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2895130

PAML 4: phylogenetic analysis by maximum likelihood

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2895130

Pattern pluralism and the Tree of Life hypothesis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2895130

Recombination and the nature of bacterial speciation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2895130

Mismatch induced speciation in Salmonella: model and data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2895130

The nature of plant species

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2895130

An empirical examination of the utility of codon-substitution models in phylogeny reconstruction

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2895130

Hidden likelihood support in genomic data: can forty-five wrongs make a right?

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2895130

Fuzzy species among recombinogenic bacteria

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2895130

An assessment of accuracy, error, and conflict with support values from genome-scale phylogenetic data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2895130

Neighbor-net: an agglomerative method for the construction of phylogenetic networks

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2895130

MrBayes 3: Bayesian phylogenetic inference under mixed models

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2895130

Imbroglios of viral taxonomy: genetic exchange and failings of phenetic approaches

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2895130

Gene transfer in bacteria: speciation without species?

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2895130

Relationships between gene trees and species trees

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2895130

Homologous recombination in Escherichia coli: dependence on substrate length and homology

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2895130

Recombination in Escherichia coli and the definition of biological species

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2895130

Role of interspecies transfer of chromosomal genes in the evolution of penicillin resistance in pathogenic and commensal Neisseria species

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2895130

A molecular phylogeny of enteric bacteria and implications for a bacterial species concept

5 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1001291107

Temporal fragmentation of speciation in bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1001291107

Yersinia pestis: an instant species?

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1001291107

Santa Rosalia revisited: why are there so many species of bacteria?

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1001291107

Convergence of Campylobacter species: implications for bacterial evolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1001291107

Sexual isolation in Acinetobacter baylyi is locus-specific and varies 10,000-fold over the genome

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2895130

29 October 2018

Identifiers

DOI

10.1073/PNAS.1001291107

1 reference

30 July 2017

0 references

1 reference

30 July 2017

1 reference