RJPrimers: unique transposable element insertion junction discovery and PCR primer design for marker development. (Q33957536)

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3 February 2020

title

RJPrimers: unique transposable element insertion junction discovery and PCR primer design for marker development (English)

1 reference

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3 February 2020

1 reference

4

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3 February 2020

7

Jan Dvorak

1 reference

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3 February 2020

1

Frank M You

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3 February 2020

author name string

Humphrey Wanjugi

2

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3 February 2020

Naxin Huo

3

1 reference

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3 February 2020

Ming-Cheng Luo

5

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3 February 2020

Olin D Anderson

6

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3 February 2020

Yong Q Gu

8

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3 February 2020

language of work or name

English

0 references

publication date

23 May 2010

1 reference

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3 February 2020

published in

Nucleic Acids Research

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3 February 2020

volume

38

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3 February 2020

issue

Web Server issue

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3 February 2020

page(s)

W313-20

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Creative Commons Attribution-NonCommercial 2.5 Generic

3 February 2020

copyright license

start time

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Insertion site-based polymorphism markers open new perspectives for genome saturation and marker-assisted selection in wheat

1 reference

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JunctionViewer: customizable annotation software for repeat-rich genomic regions

5 July 2018

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BatchPrimer3: a high throughput web application for PCR and sequencing primer design

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896120

A unified classification system for eukaryotic transposable elements

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896120

LTR_FINDER: an efficient tool for the prediction of full-length LTR retrotransposons

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896120

Precise centromere mapping using a combination of repeat junction markers and chromatin immunoprecipitation-polymerase chain reaction.

5 July 2018

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Analysis and mapping of randomly chosen bacterial artificial chromosome clones from hexaploid bread wheat

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896120

Sequence composition, organization, and evolution of the core Triticeae genome

5 July 2018

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A web server for performing electronic PCR.

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896120

The TIGR Plant Repeat Databases: a collective resource for the identification of repetitive sequences in plants

5 July 2018

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Automated de novo identification of repeat sequence families in sequenced genomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896120

Primer3 on the WWW for general users and for biologist programmers

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896120

Retrotransposon-based insertion polymorphisms (RBIP) for high throughput marker analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896120

Sequence mapping by electronic PCR

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896120

Characterizing the composition and evolution of homoeologous genomes in hexaploid wheat through BAC-end sequencing on chromosome 3B.

5 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ425

LTR_STRUC: a novel search and identification program for LTR retrotransposons

21 January 2018

1 reference

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https://api.crossref.org/works/10.1093%2FNAR%2FGKQ425

New separation-free assay technique for SNPs using two-photon excitation fluorometry.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ425

Rapid development of PCR-based genome-specific repetitive DNA junction markers in wheat.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896120

IRAP and REMAP for retrotransposon-based genotyping and fingerprinting

29 October 2018

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12 December 2020

MIPS plant genome information resources

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12 December 2020

Survey of transposable elements from rice genomic sequences

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12 December 2020

Genetic distribution of Bare-1-like retrotransposable elements in the barley genome revealed by sequence-specific amplification polymorphisms (S-SAP)

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKQ425

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20497996%20AND%20SRC:MED&resulttype=core&format=json

journals/nar/YouWHLLADG10

3 February 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20497996%20AND%20SRC:MED&resulttype=core&format=json

3 February 2020

1 reference