chipD: a web tool to design oligonucleotide probes for high-density tiling arrays (Q33957807)

30 July 2017

chipD: a web tool to design oligonucleotide probes for high-density tiling arrays (English)

1 reference

30 July 2017

Yann S Dufour

1

1 reference

30 July 2017

Gary E Wesenberg

2

1 reference

30 July 2017

Andrew J Tritt

3

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30 July 2017

Jeremy D Glasner

4

1 reference

30 July 2017

Nicole T Perna

5

1 reference

30 July 2017

Julie C Mitchell

6

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30 July 2017

Timothy J Donohue

7

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30 July 2017

language of work or name

English

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publication date

6 June 2010

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30 July 2017

Nucleic Acids Research

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30 July 2017

38

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30 July 2017

Web Server issue

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30 July 2017

W321-5

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Creative Commons Attribution-NonCommercial 2.5 Generic

30 July 2017

start time

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

Rho directs widespread termination of intragenic and stable RNA transcription.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896189

An evaluation of custom microarray applications: the oligonucleotide design challenge.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896189

Organization and evolution of the biological response to singlet oxygen stress

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896189

Getting started in tiling microarray analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896189

Optimized design and assessment of whole genome tiling arrays.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896189

MAMMOT--a set of tools for the design, management and visualization of genomic tiling arrays

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896189

Design optimization methods for genomic DNA tiling arrays

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896189

Selection of optimal oligonucleotide probes for microarrays using multiple criteria, global alignment and parameter estimation.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896189

OligoWiz 2.0--integrating sequence feature annotation into the design of microarray probes.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896189

Applications of DNA tiling arrays for whole-genome analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896189

Probe selection for high-density oligonucleotide arrays

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896189

OligoArray 2.0: design of oligonucleotide probes for DNA microarrays using a thermodynamic approach

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896189

A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896189

DNA probes: applications of the principles of nucleic acid hybridization

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896189

Picky: oligo microarray design for large genomes.

5 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ517

Optimization of probe coverage for high-resolution oligonucleotide aCGH.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ517

Probe selection for DNA microarrays using OligoWiz.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ517

21 January 2018

Identifiers

DOI

10.1093/NAR/GKQ517

1 reference

journals/nar/DufourWTGPMD10

30 July 2017

1 reference

DBLP Dataset 2021-01-02

release_mtlgxzkmyfhahmg6igzke6xgyy

28 January 2021

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/mtlgxzkmyfhahmg6igzke6xgyy

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMCID

2896189

1 reference

30 July 2017

1 reference