A 'universal' type II chaperonin PCR detection system for the investigation of Archaea in complex microbial communities (Q33966874)

30 July 2017

title

A 'universal' type II chaperonin PCR detection system for the investigation of Archaea in complex microbial communities (English)

1 reference

30 July 2017

Bonnie Chaban

1

0 references

Janet E. Hill

object named as

Janet E Hill

series ordinal

2

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publication date

21 July 2011

1 reference

30 July 2017

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30 July 2017

volume

6

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30 July 2017

issue

2

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30 July 2017

page(s)

430-439

1 reference

Assessment of the microbial ecology of ruminal methanogens in cattle with different feed efficiencies

30 July 2017

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28 July 2018

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28 July 2018

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Pyrosequencing of the chaperonin-60 universal target as a tool for determining microbial community composition

28 July 2018

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Chaperones and protein folding in the archaea

28 July 2018

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The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

28 July 2018

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Application of rpoB sequence similarity analysis, REP-PCR and BOX-PCR for the differentiation of species within the genus Geobacillus.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260514

Quantitation and diversity analysis of ruminal methanogenic populations in response to the antimethanogenic compound bromochloromethane.

28 July 2018

1 reference

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Molecular diversity of methanogens in feedlot cattle from Ontario and Prince Edward Island, Canada

28 July 2018

1 reference

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NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genes

28 July 2018

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Phylogenetic analysis of archaea in three fractions of cow rumen based on the 16S rDNA sequence

28 July 2018

1 reference

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Characterization of intestinal microbiota and response to dietary virginiamycin supplementation in the broiler chicken

28 July 2018

1 reference

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Microbial biogeography: putting microorganisms on the map

28 July 2018

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Comparison of ileum microflora of pigs fed corn-, wheat-, or barley-based diets by chaperonin-60 sequencing and quantitative PCR

28 July 2018

1 reference

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Review and re-analysis of domain-specific 16S primers

28 July 2018

1 reference

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Isolating "uncultivable" microorganisms in pure culture in a simulated natural environment

28 July 2018

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Recurrent paralogy in the evolution of archaeal chaperonins

28 July 2018

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The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

28 July 2018

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TreeView: an application to display phylogenetic trees on personal computers

28 July 2018

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The chaperonin containing t-complex polypeptide 1 (TCP-1). Multisubunit machinery assisting in protein folding and assembly in the eukaryotic cytosol.

28 July 2018

1 reference

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Basic local alignment search tool

28 July 2018

1 reference

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A molecular chaperone from a thermophilic archaebacterium is related to the eukaryotic protein t-complex polypeptide-1.

28 July 2018

1 reference

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Phylogenetic structure of the prokaryotic domain: The primary kingdoms

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260514

Archaeal habitats--from the extreme to the ordinary

28 July 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.96

Enumeration of specific bacterial populations in complex intestinal communities using quantitative PCR based on the chaperonin-60 target.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.96

Partial sequence comparison of the rpoB, sodA, groEL and gyrB genes within the genus Streptococcus

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.96

Identification of Campylobacter spp. and discrimination from Helicobacter and Arcobacter spp. by direct sequencing of PCR-amplified cpn60 sequences and comparison to cpnDB, a chaperonin reference sequence database

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.96

cpnDB: a chaperonin sequence database

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.96

Improved template representation in cpn60 polymerase chain reaction (PCR) product libraries generated from complex templates by application of a specific mixture of PCR primers.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.96

The mcrA gene as an alternative to 16S rRNA in the phylogenetic analysis of methanogen populations in landfill

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.96

A putative new order of methanogenic Archaea inhabiting the human gut, as revealed by molecular analyses of the mcrA gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.96

Identification and phylogenetic sorting of bacterial lineages with universally conserved genes and proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.96

Phylogenetic analysis of methyl coenzyme-M reductase detected from the bovine rumen

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.96

Comparison of gyrB gene sequences, 16S rRNA gene sequences and DNA-DNA hybridization in the Bacillus subtilis group

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.96

Application of recA and rpoB sequence analysis on phylogeny and molecular identification of Geobacillus species

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.96

Molecular diversity of rumen methanogens from sheep in Western Australia.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.96

Application of a recN sequence similarity analysis to the identification of species within the bacterial genus Geobacillus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.96

Value of recN sequences for species identification and as a phylogenetic marker within the family "Leuconostocaceae".

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260514

A phylogenetic definition of the major eubacterial taxa.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260514

Distinct types of rRNA operons exist in the genome of the actinomycete Thermomonospora chromogena and evidence for horizontal transfer of an entire rRNA operon

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3260514

The phylogeny of prokaryotes

29 October 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.96

Resolution of Phenotypically Distinct Strains of Enterococcus spp. in a Complex Microbial Community Using cpn60 Universal Target Sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.96

A Phylogenetic Definition of the Major Eubacterial Taxa

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2011.96

Denaturants or cosolvents improve the specificity of PCR amplification of a G + C-rich DNA using genetically engineered DNA polymerases

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21776031

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/ISMEJ.2011.96

1 reference

Dimensions Publication ID

30 July 2017

0 references

1 reference

30 July 2017

1 reference