Rapid topology mapping of Escherichia coli inner-membrane proteins by prediction and PhoA/GFP fusion analysis (Q34014007)

30 July 2017

Rapid topology mapping of Escherichia coli inner-membrane proteins by prediction and PhoA/GFP fusion analysis (English)

1 reference

30 July 2017

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1 reference

7

Gunnar von Heijne

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David Drew

object named as

David Drew

1

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author name string

Dan Sjöstrand

2

1 reference

30 July 2017

Johan Nilsson

3

1 reference

30 July 2017

Thomas Urbig

4

1 reference

30 July 2017

Chen-ni Chin

5

1 reference

30 July 2017

Jan-Willem de Gier

6

1 reference

30 July 2017

language of work or name

English

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publication date

26 February 2002

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Proceedings of the National Academy of Sciences of the United States of America

30 July 2017

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30 July 2017

99

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30 July 2017

5

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30 July 2017

2690-2695

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Evaluation of methods for the prediction of membrane spanning regions

30 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122409

Recent advances in the understanding of membrane protein assembly and structure

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122409

Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122409

Export of active green fluorescent protein to the periplasm by the twin-arginine translocase (Tat) pathway in Escherichia coli.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122409

Translocation of jellyfish green fluorescent protein via the Tat system of Escherichia coli and change of its periplasmic localization in response to osmotic up-shock

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122409

Green fluorescent protein functions as a reporter for protein localization in Escherichia coli

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122409

Membrane topology of the Bacillus subtilis pro-sigma(K) processing complex

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122409

A family of membrane-embedded metalloproteases involved in regulated proteolysis of membrane-associated transcription factors

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122409

EcoGene: a genome sequence database for Escherichia coli K-12.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122409

Divergent evolution of membrane protein topology: the Escherichia coli RnfA and RnfE homologues

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122409

Principles governing amino acid composition of integral membrane proteins: application to topology prediction

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122409

Topology prediction for helical transmembrane proteins at 86% accuracy

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122409

Topology of the ExbB protein in the cytoplasmic membrane of Escherichia coli.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122409

Analysis of the topology of a membrane protein by using a minimum number of alkaline phosphatase fusions

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122409

A model recognition approach to the prediction of all-helical membrane protein structure and topology

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122409

TopPred II: an improved software for membrane protein structure predictions

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122409

Genetic and molecular characterization of the Escherichia coli secD operon and its products

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122409

High-level expression of M13 gene II protein from an inducible polycistronic messenger RNA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122409

Topology analysis of the SecY protein, an integral membrane protein involved in protein export in Escherichia coli.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122409

Beta-lactamase as a probe of membrane protein assembly and protein export

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122409

Analysis of membrane protein topology using alkaline phosphatase and beta-galactosidase gene fusions

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122409

Escherichia coli alkaline phosphatase fails to acquire disulfide bonds when retained in the cytoplasm

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122409

Membrane protein structure prediction. Hydrophobicity analysis and the positive-inside rule

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122409

A collection of well characterised integral membrane proteins.

5 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052018199

De novo design of integral membrane proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052018199

Rapid protein-folding assay using green fluorescent protein

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122409

Folding and assembly of bacterial alkaline phosphatase in vitro and in vivo.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122409

Mutations eliminating the protein export function of a membrane-spanning sequence.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122409

Sequence of the leader peptidase gene of Escherichia coli and the orientation of leader peptidase in the bacterial envelope

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122409

Consensus predictions of membrane protein topology

29 October 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052018199

Green fluorescent protein as an indicator to monitor membrane protein overexpression in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052018199

Control of topology and mode of assembly of a polytopic membrane protein by positively charged residues

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052018199

Transmembrane topology prediction methods: a re-assessment and improvement by a consensus method using a dataset of experimentally-characterized transmembrane topologies

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/11867724

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The role of the polar, carboxyl-terminal domain of Escherichia coli leader peptidase in its translocation across the plasma membrane

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/11867724

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.052018199

1 reference

30 July 2017

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1 reference

30 July 2017

1 reference