Dissecting the mechanical unfolding of ubiquitin (Q34015795)

30 July 2017

title

Dissecting the mechanical unfolding of ubiquitin (English)

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30 July 2017

Anders Irbäck

1

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30 July 2017

Simon Mitternacht

series ordinal

2

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30 July 2017

Sandipan Mohanty

series ordinal

3

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30 July 2017

language of work or name

English

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publication date

7 September 2005

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Proceedings of the National Academy of Sciences of the United States of America

30 July 2017

published in

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30 July 2017

volume

102

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30 July 2017

issue

38

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30 July 2017

page(s)

13427-13432

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Simultaneous determination of protein structure and dynamics.

30 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1224613

Conformational changes during the nanosecond-to-millisecond unfolding of ubiquitin.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1224613

Folding thermodynamics of peptides

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1224613

Oligomerization of amyloid Abeta16-22 peptides using hydrogen bonds and hydrophobicity forces

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1224613

Reversible mechanical unfolding of single ubiquitin molecules

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1224613

Simultaneous atomic force microscope and fluorescence measurements of protein unfolding using a calibrated evanescent wave

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1224613

The unfolding kinetics of ubiquitin captured with single-molecule force-clamp techniques

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1224613

Thermodynamics of alpha- and beta-structure formation in proteins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1224613

Pulling geometry defines the mechanical resistance of a beta-sheet protein

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1224613

Evidence for sequential barriers and obligatory intermediates in apparent two-state protein folding

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1224613

Mechanical unfolding of a titin Ig domain: structure of unfolding intermediate revealed by combining AFM, molecular dynamics simulations, NMR and protein engineering

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1224613

Mechanisms underlying ubiquitination

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1224613

Themes and variations on ubiquitylation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1224613

The key event in force-induced unfolding of Titin's immunoglobulin domains

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1224613

Native topology determines force-induced unfolding pathways in globular proteins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1224613

Unfolding pathways of individual bacteriorhodopsins.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1224613

Mechanical unfolding of a beta-hairpin using molecular dynamics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1224613

Observation of strange kinetics in protein folding

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1224613

Unraveling proteins: a molecular mechanics study

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1224613

Stretching lattice models of protein folding

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1224613

RASMOL: biomolecular graphics for all

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1224613

Theoretical Studies of Protein Folding

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1224613

A multiubiquitin chain is confined to specific lysine in a targeted short-lived protein

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1224613

Folding of chymotrypsin inhibitor 2. 1. Evidence for a two-state transition

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1224613

The mechanical stability of ubiquitin is linkage dependent

5 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0501581102

Force-clamp spectroscopy monitors the folding trajectory of a single protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0501581102

Folding thermodynamics of three beta-sheet peptides: a model study

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0501581102

Simulation of the mechanical unfolding of ubiquitin: probing different unfolding reaction coordinates by changing the pulling geometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0501581102

Unfolding proteins under external forces: a solvable model under the self-consistent pair contact probability approximation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0501581102

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0501581102

Stretching of a polymer below the theta point

21 January 2018

1 reference

12 December 2020

Steered molecular dynamics simulations of force-induced protein domain unfolding

1 reference

12 December 2020

Reversible stretching of random heteropolymers

1 reference

12 December 2020

Thermal folding and mechanical unfolding pathways of protein secondary structures

1 reference

12 December 2020

Evidence for a three-state model of protein folding from kinetic analysis of ubiquitin variants with altered core residues

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0501581102

1 reference

release_hqbm7muoffaivas5ca4jxi767a

30 July 2017

0 references

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/hqbm7muoffaivas5ca4jxi767a

24 November 2022

mapped directly with Wikidata item

PMC publication ID

1224613

1 reference

30 July 2017

1 reference