An evolutionary perspective on synonymous codon usage in unicellular organisms (Q34048972)

30 July 2017

An evolutionary perspective on synonymous codon usage in unicellular organisms (English)

1 reference

30 July 2017

P M Sharp

1

1 reference

PubMed ID

3104616

30 July 2017

W H Li

series ordinal

2

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30 July 2017

1 January 1986

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Journal of Molecular Evolution

30 July 2017

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30 July 2017

24

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30 July 2017

1-2

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30 July 2017

28-38

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https://scigraph.springernature.com/pub.10.1007/bf02099948

30 July 2017

0 references

cites work

Delineation of coding areas in DNA sequences through assignment of codon probabilities.

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Crossref

https://api.crossref.org/works/10.1007%2FBF02099948

Is there selection against wobble in codon-anticodon pairing?

21 January 2018

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12 December 2020

Preferential codon usage in prokaryotic genes: the optimal codon-anticodon interaction energy and the selective codon usage in efficiently expressed genes

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12 December 2020

A new method for estimating synonymous and nonsynonymous rates of nucleotide substitution considering the relative likelihood of nucleotide and codon changes

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Genetic variability maintained in a finite population due to mutational production of neutral and nearly neutral isoalleles

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Genetic engineering of extracellular enzyme systems of Bacilli

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Nonrandomness of point mutation as reflected in nucleotide substitutions in pseudogenes and its evolutionary implications

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Correlation between the abundance of yeast transfer RNAs and the occurrence of the respective codons in protein genes. Differences in synonymous codon choice patterns of yeast and Escherichia coli with reference to the abundance of isoaccepting tran

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Codon-defined ribosomal pausing in Escherichia coli detected by using the pyrE attenuator to probe the coupling between transcription and translation

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Doublet frequencies in evolutionary distinct groups

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Evidence for use of rare codons in the dnaG gene and other regulatory genes of Escherichia coli

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Markedly unbiased codon usage in Bacillus subtilis

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Codon usage in muscle genes and liver genes

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DNA and the neutral theory

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Codon usage and genome composition

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12 December 2020

Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes: A proposal for a synonymous codon choice that is optimal for the E. coli translational system

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12 December 2020

Codon usage in yeast: cluster analysis clearly differentiates highly and lowly expressed genes

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Effect of distribution of unfavourable codons on the maximum rate of gene expression by an heterologous organism.

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12 December 2020

Codon catalog usage and the genome hypothesis

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Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes

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Selection pressures on codon usage in the complete genome of bacteriophage T7

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Neighboring base effects on substitution rates in pseudogenes

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The relationship between base composition and codon usage in bacterial genes and its use for the simple and reliable identification of protein-coding sequences

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Non-Darwinian Evolution

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Codon usage in regulatory genes in Escherichia coli does not reflect selection for 'rare' codons

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Codon selection in yeast

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Analysis and comparison of the internal promoter, pE, of the ilvGMEDA operons from Escherichia coli K-12 and Salmonella typhimurium

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Codon usage in bacteria: correlation with gene expressivity

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The rate of synonymous substitution in enterobacterial genes is inversely related to codon usage bias

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Interaction of silent and replacement changes in eukaryotic coding sequences

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Possibility of extensive neutral evolution under stabilizing selection with special reference to nonrandom usage of synonymous codons

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The codon preference plot: graphic analysis of protein coding sequences and prediction of gene expression.

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The A+T-rich genome of Herpesvirus saimiri contains a highly conserved gene for thymidylate synthase.

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The mosaic genome of warm-blooded vertebrates

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Mechanisms of spontaneous mutagenesis: an analysis of the spectrum of spontaneous mutation in the Escherichia coli lacI gene.

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Codon catalog usage is a genome strategy modulated for gene expressivity

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12 December 2020

Models of nearly neutral mutations with particular implications for nonrandom usage of synonymous codons.

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12 December 2020

Codon usage can affect efficiency of translation of genes inEscherichia coli

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12 December 2020

Codon usage and tRNA content in unicellular and multicellular organisms

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12 December 2020

Identifiers

DOI

10.1007/BF02099948

1 reference

PubMed ID

3104616

Dimensions Publication ID

30 July 2017

0 references

1 reference

PubMed ID

3104616