Characterization and development of EST-derived SSR markers in cultivated sweetpotato (Ipomoea batatas) (Q34051611)

30 July 2017

title

Characterization and development of EST-derived SSR markers in cultivated sweetpotato (Ipomoea batatas) (English)

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30 July 2017

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Zhangying Wang

1

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30 July 2017

Jun Li

2

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30 July 2017

Zhongxia Luo

3

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30 July 2017

Lifei Huang

4

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30 July 2017

Xinliang Chen

5

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30 July 2017

Boping Fang

6

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30 July 2017

Yujun Li

7

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30 July 2017

Jingyi Chen

8

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30 July 2017

Xiongjian Zhang

9

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30 July 2017

language of work or name

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20 October 2011

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30 July 2017

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30 July 2017

volume

11

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30 July 2017

page(s)

139

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De novo assembly and characterization of root transcriptome using Illumina paired-end sequencing and development of cSSR markers in sweet potato (Ipomoea batatas)

30 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3206431

Development of 1,030 genomic SSR markers in switchgrass

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3206431

A sweet potato gene index established by de novo assembly of pyrosequencing and Sanger sequences and mining for gene-based microsatellite markers

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3206431

Developmenrt of EST-SSR and genomic-SSR markers to assess genetic diversity in Jatropha Curcas L

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3206431

Development of a EST dataset and characterization of EST-SSRs in a traditional Chinese medicinal plant, Epimedium sagittatum (Sieb. Et Zucc.) Maxim

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3206431

Development of SSR markers derived from SSR-enriched genomic library of eggplant (Solanum melongena L.).

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3206431

Utility of EST-derived SSR in cultivated peanut (Arachis hypogaea L.) and Arachis wild species

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3206431

Tall fescue genomic SSR markers: development and transferability across multiple grass species

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3206431

Nonrandom distribution and frequencies of genomic and EST-derived microsatellite markers in rice, wheat, and barley

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3206431

Genic microsatellite markers in plants: features and applications

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3206431

Robust simple sequence repeat markers for spruce (Picea spp.) from expressed sequence tags

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3206431

Molecular markers from the transcribed/expressed region of the genome in higher plants.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3206431

A comparison of sequence-based polymorphism and haplotype content in transcribed and anonymous regions of the barley genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3206431

Transferable EST-SSR markers for the study of polymorphism and genetic diversity in bread wheat.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3206431

TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3206431

In silico analysis on frequency and distribution of microsatellites in ESTs of some cereal species.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3206431

Data mining for simple sequence repeats in expressed sequence tags from barley, maize, rice, sorghum and wheat

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3206431

Microsatellite markers from sugarcane (Saccharum spp.) ESTs cross transferable to erianthus and sorghum

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3206431

Computational and experimental characterization of physically clustered simple sequence repeats in plants

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3206431

The mutation rates of di-, tri- and tetranucleotide repeats in Drosophila melanogaster

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3206431

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3206431

Relative mutation rates at di-, tri-, and tetranucleotide microsatellite loci

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3206431

Microsatellite libraries enriched for several microsatellite sequences in plants.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3206431

Microsatellites are preferentially associated with nonrepetitive DNA in plant genomes

5 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-11-139

Medicago truncatula EST-SSRs reveal cross-species genetic markers for Medicago spp.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-11-139

High transferability of bread wheat EST-derived SSRs to other cereals

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-11-139

Mining and survey of simple sequence repeats in expressed sequence tags of dicotyledonous species

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-11-139

One hundred and one new microsatellite loci derived from ESTs (EST-SSRs) in bread wheat

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-11-139

Development and mapping of EST-derived simple sequence repeat markers for hexaploid wheat

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-11-139

Identification, characterization and utilization of EST-derived genic microsatellite markers for genome analyses of coffee and related species

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2229-11-139

Exploiting EST databases for the development and characterization of gene-derived SSR-markers in barley (Hordeum vulgare L.).

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3206431

A rapid CTAB DNA isolation technique useful for RAPD fingerprinting and other PCR applications

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3206431

Tall fescue EST-SSR markers with transferability across several grass species

28 October 2018

1 reference

12 December 2020

Universal linker and ligation procedures for construction of genomic DNA libraries enriched for microsatellites

1 reference

12 December 2020

Cross-species transferability of G. arboreum-derived EST-SSRs in the diploid species of Gossypium

1 reference

12 December 2020

Development of a set of public SSR markers derived from genomic sequence of a rapid cycling Brassica oleracea L. genotype

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2229-11-139

1 reference

Dimensions Publication ID

30 July 2017

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1 reference

30 July 2017

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