Central domain deletions affect the SAXS solution structure and function of yeast Hsp40 proteins Sis1 and Ydj1. (Q34051682)

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14 January 2020

title

Central domain deletions affect the SAXS solution structure and function of yeast Hsp40 proteins Sis1 and Ydj1 (English)

1 reference

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14 January 2020

1 reference

4

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14 January 2020

author name string

Julio C Silva

1

1 reference

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14 January 2020

Julio C Borges

2

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14 January 2020

Douglas M Cyr

3

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14 January 2020

Iris L Torriani

5

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14 January 2020

publication date

19 October 2011

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14 January 2020

published in

BMC Structural Biology

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14 January 2020

volume

11

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14 January 2020

page(s)

40

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Analysis of molecular targets of Mycobacterium tuberculosis by analytical ultracentrifugation.

14 January 2020

cites work

1 reference

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Polypeptide transfer from Hsp40 to Hsp70 molecular chaperones

5 July 2018

1 reference

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The crystal structure of the putative peptide-binding fragment from the human Hsp40 protein Hdj1

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236591

Global rigid body modeling of macromolecular complexes against small-angle scattering data

5 July 2018

1 reference

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Low resolution structural study of two human HSP40 chaperones in solution. DJA1 from subfamily A and DJB4 from subfamily B have different quaternary structures

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236591

SAXS study of the PIR domain from the Grb14 molecular adaptor: a natively unfolded protein with a transient structure primer?

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236591

Exchangeable chaperone modules contribute to specification of type I and type II Hsp40 cellular function

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236591

The crystal structure of the yeast Hsp40 Ydj1 complexed with its peptide substrate

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236591

Specificity of class II Hsp40 Sis1 in maintenance of yeast prion [RNQ+].

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236591

Modern analytical ultracentrifugation in protein science: a tutorial review

5 July 2018

1 reference

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Molecular chaperones in the cytosol: from nascent chain to folded protein

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236591

Size-distribution analysis of proteins by analytical ultracentrifugation: strategies and application to model systems

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236591

Determination of domain structure of proteins from X-ray solution scattering

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236591

The role of Sis1 in the maintenance of the [RNQ+] prion

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236591

An essential role for the substrate-binding region of Hsp40s in Saccharomyces cerevisiae

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236591

The crystal structure of the peptide-binding fragment from the yeast Hsp40 protein Sis1

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236591

Size-Distribution Analysis of Macromolecules by Sedimentation Velocity Ultracentrifugation and Lamm Equation Modeling

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236591

The glycine-phenylalanine-rich region determines the specificity of the yeast Hsp40 Sis1.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236591

Restoring low resolution structure of biological macromolecules from solution scattering using simulated annealing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236591

Mechanism of regulation of hsp70 chaperones by DnaJ cochaperones

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236591

Chaperone-mediated protein folding

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236591

Protein folding activity of Hsp70 is modified differentially by the hsp40 co-chaperones Sis1 and Ydj1.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236591

The Hsp70 and Hsp60 chaperone machines

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236591

Structure-function analysis of the zinc finger region of the DnaJ molecular chaperone

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236591

Molecular chaperones in cellular protein folding

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236591

Kinetics of molecular chaperone action

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236591

DnaJ-like proteins: molecular chaperones and specific regulators of Hsp70.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236591

Characterization of YDJ1: a yeast homologue of the bacterial dnaJ protein

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236591

Characterization of SIS1, a Saccharomyces cerevisiae homologue of bacterial dnaJ proteins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236591

Successive action of DnaK, DnaJ and GroEL along the pathway of chaperone-mediated protein folding

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236591

Direct interactions between molecular chaperones heat-shock protein (Hsp) 70 and Hsp40: yeast Hsp70 Ssa1 binds the extreme C-terminal region of yeast Hsp40 Sis1.

5 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1472-6807-11-40

Conserved central domains control the quaternary structure of type I and type II Hsp40 molecular chaperones.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1472-6807-11-40

Identification of essential residues in the type II Hsp40 Sis1 that function in polypeptide binding

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1472-6807-11-40

Heat-induced unfolding of neocarzinostatin, a small all-beta protein investigated by small-angle X-ray scattering

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1472-6807-11-40

How random is a highly denatured protein?

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1472-6807-11-40

The NH2-terminal 108 amino acids of the Escherichia coli DnaJ protein stimulate the ATPase activity of DnaK and are sufficient for lambda replication.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3236591

The conserved carboxyl terminus and zinc finger-like domain of the co-chaperone Ydj1 assist Hsp70 in protein folding

28 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22011374

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

J proteins catalytically activate Hsp70 molecules to trap a wide range of peptide sequences

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22011374

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1472-6807-11-40

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22011374%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

14 January 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22011374%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

PubMed publication ID

22011374

1 reference