Accelerated recruitment of new brain development genes into the human genome (Q34058009)

30 July 2017

Accelerated recruitment of new brain development genes into the human genome (English)

1 reference

30 July 2017

3

Maria D Vibranovski

1 reference

30 July 2017

4

Manyuan Long

1 reference

30 July 2017

Yong E Zhang

1

1 reference

PubMed ID

22028629

30 July 2017

Patrick Landback

series ordinal

2

1 reference

PubMed ID

22028629

30 July 2017

language of work or name

English

0 references

publication date

18 October 2011

1 reference

30 July 2017

1 reference

30 July 2017

9

1 reference

30 July 2017

10

1 reference

30 July 2017

e1001179

1 reference

Creative Commons Attribution 4.0 International

30 July 2017

start time

18 October 2011

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

limma

object named as

LIMMA

2 references

22 June 2022

https://europepmc.org/article/PMC/3196496

based on heuristic

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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A phylogenetically based transcriptome age index mirrors ontogenetic divergence patterns

5 July 2018

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Chromosomal redistribution of male-biased genes in mammalian evolution with two bursts of gene gain on the X chromosome

5 July 2018

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Age-dependent chromosomal distribution of male-biased genes in Drosophila

5 July 2018

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MicroRNA, mRNA, and protein expression link development and aging in human and macaque brain

5 July 2018

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Relaxed purifying selection and possibly high rate of adaptation in primate lineage-specific genes

5 July 2018

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Phylostratigraphic tracking of cancer genes suggests a link to the emergence of multicellularity in metazoa

5 July 2018

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A survey of sequence alignment algorithms for next-generation sequencing

5 July 2018

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Contrasts between adaptive coding and noncoding changes during human evolution

5 July 2018

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5 July 2018

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The subtelomere of Oryza sativa chromosome 3 short arm as a hot bed of new gene origination in rice

5 July 2018

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Molecular networks involved in mouse cerebral corticogenesis and spatio-temporal regulation of Sox4 and Sox11 novel antisense transcripts revealed by transcriptome profiling.

5 July 2018

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Human-specific genes may offer a unique window into human cell signaling

5 July 2018

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Evolution of the neocortex: a perspective from developmental biology

5 July 2018

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Evolutionary processes acting on candidate cis-regulatory regions in humans inferred from patterns of polymorphism and divergence

5 July 2018

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Functional and evolutionary insights into human brain development through global transcriptome analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Gene expression in the prefrontal cortex during adolescence: implications for the onset of schizophrenia

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Transcriptional neoteny in the human brain

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Histone modifications at human enhancers reflect global cell-type-specific gene expression

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

A census of human transcription factors: function, expression and evolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

RNA-based gene duplication: mechanistic and evolutionary insights

5 July 2018

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RNA-Seq: a revolutionary tool for transcriptomics

5 July 2018

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NCBI GEO: archive for high-throughput functional genomic data

5 July 2018

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InterPro: the integrative protein signature database

5 July 2018

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Genetic basis of human brain evolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Retrocopy contributions to the evolution of the human genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Mapping and quantifying mammalian transcriptomes by RNA-Seq

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

The evolution of courtship behaviors through the origination of a new gene in Drosophila

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

The gene regulatory logic of transcription factor evolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

A novel method of differential gene expression analysis using multiple cDNA libraries applied to the identification of tumour endothelial genes

5 July 2018

1 reference

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Chromosomal gene movements reflect the recent origin and biology of therian sex chromosomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Cerebellum-like structures and their implications for cerebellar function

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Adaptive evolution of the insulin two-gene system in mouse

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Database resources of the National Center for Biotechnology Information

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

PRIDE: new developments and new datasets

5 July 2018

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Promoter regions of many neural- and nutrition-related genes have experienced positive selection during human evolution.

5 July 2018

1 reference

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The locus of evolution: evo devo and the genetics of adaptation

5 July 2018

1 reference

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PAML 4: phylogenetic analysis by maximum likelihood

5 July 2018

1 reference

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Conservation of regional gene expression in mouse and human brain

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Comment on "Ongoing adaptive evolution of ASPM, a brain size determinant in Homo sapiens".

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Rate of evolution in brain-expressed genes in humans and other primates

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

The UCSC genome browser database: update 2007.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

NATsDB: Natural Antisense Transcripts DataBase

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Human lineage-specific amplification, selection, and neuronal expression of DUF1220 domains

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Comment on "Ongoing adaptive evolution of ASPM, a brain size determinant in Homo sapiens" and "Microcephalin, a gene regulating brain size, continues to evolve adaptively in humans".

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Primate segmental duplications: crucibles of evolution, diversity and disease

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Linear models and empirical bayes methods for assessing differential expression in microarray experiments

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Hedgehog signalling from the zona limitans intrathalamica orchestrates patterning of the zebrafish diencephalon

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Natural selection on protein-coding genes in the human genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Ongoing adaptive evolution of ASPM, a brain size determinant in Homo sapiens.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Microcephalin, a Gene Regulating Brain Size, Continues to Evolve Adaptively in Humans

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Accelerated evolution of nervous system genes in the origin of Homo sapiens

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Entrez Gene: gene-centered information at NCBI

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Evolving protein functional diversity in new genes of Drosophila

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Bioconductor: open software development for computational biology and bioinformatics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

The Ensembl core software libraries

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

The origin of new genes: glimpses from the young and old

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Dntf-2r, a young Drosophila retroposed gene with specific male expression under positive Darwinian selection.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Spatial memory and hippocampal pallium through vertebrate evolution: insights from reptiles and teleost fish.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Origin of sphinx, a young chimeric RNA gene in Drosophila melanogaster

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Positive selection of a gene family during the emergence of humans and African apes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

SAGEmap: a public gene expression resource

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Functional analysis of ZNF85 KRAB zinc finger protein, a member of the highly homologous ZNF91 family

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Adaptive protein evolution at the Adh locus in Drosophila

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Evolution at two levels in humans and chimpanzees

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3196496

Transcriptional regulation and alternative splicing make for better brains.

5 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001179

Inhibitory interneurons of the human prefrontal cortex display conserved evolution of the phenotype and related genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001179

Natural selection shapes genome-wide patterns of copy-number polymorphism in Drosophila melanogaster.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001179

Parallel adaptive origins of digestive RNases in Asian and African leaf monkeys.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001179

10.1371/JOURNAL.PBIO.1001179

21 January 2018

Identifiers

DOI

1 reference

30 July 2017

1 reference

30 July 2017

1 reference

PubMed ID

22028629