Exploring molecular backgrounds of quality traits in rice by predictive models based on high-coverage metabolomics (Q34060629)

30 July 2017

Exploring molecular backgrounds of quality traits in rice by predictive models based on high-coverage metabolomics (English)

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30 July 2017

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Henning Redestig

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Miyako Kusano

object named as

Miyako Kusano

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Kazuki Saito

object named as

Kazuki Saito

10

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author name string

Kaworu Ebana

3

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30 July 2017

Makoto Kobayashi

4

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30 July 2017

Akira Oikawa

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30 July 2017

Yozo Okazaki

6

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30 July 2017

Fumio Matsuda

7

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30 July 2017

Masanori Arita

8

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30 July 2017

Naoko Fujita

9

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30 July 2017

28 October 2011

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30 July 2017

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30 July 2017

5

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30 July 2017

176

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describes a project that uses

30 July 2017

Cytoscape

object named as

Cytoscape

2 references

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

exact match

https://scigraph.springernature.com/pub.10.1186/1752-0509-5-176

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cites work

Covering chemical diversity of genetically-modified tomatoes using metabolomics for objective substantial equivalence assessment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305925

Coexpression analysis identifies Rice Starch Regulator1, a rice AP2/EREBP family transcription factor, as a novel rice starch biosynthesis regulator

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305925

Consolidating metabolite identifiers to enable contextual and multi-platform metabolomics data analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305925

Iron fortification of rice seeds through activation of the nicotianamine synthase gene

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305925

Correlation exploration of metabolic and genomic diversity in rice

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305925

Compensation for systematic cross-contribution improves normalization of mass spectrometry based metabolomics data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305925

Conceptual framework for drought phenotyping during molecular breeding

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305925

Starch as a major integrator in the regulation of plant growth

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305925

Not just a grain of rice: the quest for quality.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305925

Metabolomics for functional genomics, systems biology, and biotechnology

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305925

The development of endosperm in grasses

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305925

The complex history of the domestication of rice

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305925

Orthogonal projections to latent structures as a strategy for microarray data normalization

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305925

The metabolic signature related to high plant growth rate in Arabidopsis thaliana

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305925

pcaMethods--a bioconductor package providing PCA methods for incomplete data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305925

GOlorize: a Cytoscape plug-in for network visualization with Gene Ontology-based layout and coloring

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305925

Towards molecular breeding and improvement of rice in China

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305925

Unused natural variation can lift yield barriers in plant breeding

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305925

Green revolution: the way forward

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305925

Inference of population structure using multilocus genotype data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305925

Association mapping in structured populations

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305925

Polyamines: small molecules triggering pathways in plant growth and development

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305925

The detection of disease clustering and a generalized regression approach

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3305925

Natural variation at the DEP1 locus enhances grain yield in rice

5 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-176

Network analysis of enzyme activities and metabolite levels and their relationship to biomass in a large panel of Arabidopsis accessions

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-176

A QTL for rice grain width and weight encodes a previously unknown RING-type E3 ubiquitin ligase

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-176

Natural variation in Ghd7 is an important regulator of heading date and yield potential in rice.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-176

A chloroplastic UDP-glucose pyrophosphorylase from Arabidopsis is the committed enzyme for the first step of sulfolipid biosynthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-176

Characterization of SSIIIa-deficient mutants of rice: the function of SSIIIa and pleiotropic effects by SSIIIa deficiency in the rice endosperm.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-176

High-level tryptophan accumulation in seeds of transgenic rice and its limited effects on agronomic traits and seed metabolite profile.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-5-176

Methods of developing core collections based on the predicted genotypic value of rice ( Oryza sativa L.).

21 January 2018

1 reference

12 December 2020

Comprehensive expression profiling of rice grain filling-related genes under high temperature using DNA microarray

1 reference

12 December 2020

Application of a metabolomic method combining one-dimensional and two-dimensional gas chromatography-time-of-flight/mass spectrometry to metabolic phenotyping of natural variants in rice

1 reference

12 December 2020

Microsatellite marker-mediated analysis of the EMBRAPA Rice Core Collection genetic diversity

1 reference

12 December 2020

Identifiers

DOI

10.1186/1752-0509-5-176

1 reference

journals/bmcsb/RedestigKEKOOMAFS11

30 July 2017

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

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1 reference

30 July 2017

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