Tandemly repeated DNA families in the mouse genome (Q34060742)

30 July 2017

Tandemly repeated DNA families in the mouse genome (English)

1 reference

30 July 2017

Aleksey S Komissarov

1

1 reference

30 July 2017

Ekaterina V Gavrilova

2

1 reference

30 July 2017

Sergey Ju Demin

3

1 reference

30 July 2017

Alexander M Ishov

4

1 reference

30 July 2017

Olga I Podgornaya

5

1 reference

30 July 2017

language of work or name

English

0 references

publication date

28 October 2011

1 reference

30 July 2017

1 reference

30 July 2017

12

1 reference

30 July 2017

531

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-12-531

30 July 2017

0 references

cites work

Genome-wide characterization of centromeric satellites from multiple mammalian genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Characterization of missing human genome sequences and copy-number polymorphic insertions

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Genome-wide analysis of tandem repeats in Daphnia pulex--a comparative approach

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Two-step imprinted X inactivation: repeat versus genic silencing in the mouse

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Genome-wide mapping and assembly of structural variant breakpoints in the mouse genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Scope of medical implications of the Master Development Program hypothesis.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Identification of sister chromatids by DNA template strand sequences

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

BLAST+: architecture and applications

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Rapid evolution of mouse Y centromere repeat DNA belies recent sequence stability

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

GlaI digestion of mouse gamma-satellite DNA: study of primary structure and ACGT sites methylation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Satellite DNA spatial localization and transcriptional activity in mouse embryonic E-14 and IOUD2 stem cells.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Comparative genomics and molecular dynamics of DNA repeats in eukaryotes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Analysis of the largest tandemly repeated DNA families in the human genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Murine endogenous retroviruses

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Comparative analyses of human single- and multilocus tandem repeats

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Atomic force microscopy for imaging human metaphase chromosomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Satellite DNA in insects: a review.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Satellite DNAs between selfishness and functionality: structure, genomics and evolution of tandem repeats in centromeric (hetero)chromatin.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Proliferation-dependent and cell cycle regulated transcription of mouse pericentric heterochromatin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Organization and evolution of primate centromeric DNA from whole-genome shotgun sequence data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Human chromosome 1 satellite 3 DNA is decondensed, demethylated and transcribed in senescent cells and in A431 epithelial carcinoma cells.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Evolutionary history of mammalian transposons determined by genome-wide defragmentation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Transcription and RNA interference in the formation of heterochromatin.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Evidence for the existence of satellite DNA-containing connection between metaphase chromosomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Centromere assembly and propagation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Telomere and TRF2/MTBP localization in respect to satellite DNA during the cell cycle of mouse cell line L929.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

An RNA-dependent RNA polymerase is required for paramutation in maize

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Mouse telocentric sequences reveal a high rate of homogenization and possible role in Robertsonian translocation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Repbase Update, a database of eukaryotic repetitive elements

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Noncoding DNA, isochores and gene expression: nucleosome formation potential

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Visualization of early chromosome condensation: a hierarchical folding, axial glue model of chromosome structure

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Mouse centric and pericentric satellite repeats form distinct functional heterochromatin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Structure-specific DNA-binding proteins as the foundation for three-dimensional chromatin organization

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

DNA helix: the importance of being GC-rich

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Initial sequencing and comparative analysis of the mouse genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Coordinated methyl and RNA binding is required for heterochromatin localization of mammalian HP1alpha

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Genomic and genetic definition of a functional human centromere

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Alpha-satellite DNA of primates: old and new families

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Tandem repeats finder: a program to analyze DNA sequences

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Centromere DNA dynamics: latent centromeres and neocentromere formation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Characterization of a chromosome-specific chimpanzee alpha satellite subset: evolutionary relationship to subsets on human chromosomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Identification of a new, abundant superfamily of mammalian LTR-transposons

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Mouse centromere mapping using oligonucleotide probes that detect variants of the minor satellite.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Nucleotide sequence of mouse satellite DNA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Heterochromatin, satellite DNA, and cell function. Structural DNA of eucaryotes may support and protect genes and aid in speciation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Sequence relationships of three human satellite DNAs.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Human chromosome-specific repetitive DNA sequences: novel markers for genetic analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Sequence organization and cytological localization of the minor satellite of mouse

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Relationship of mouse minor satellite DNA to centromere activity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Isolation of a variant family of mouse minor satellite DNA that hybridizes preferentially to chromosome 4.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Pulsed-field gel analysis of alpha-satellite DNA at the human X chromosome centromere: high-frequency polymorphisms and array size estimate

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Mouse minor satellite DNA genetically maps to the centromere and is physically linked to the proximal telomere

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

Cloning of human satellite III DNA: different components are on different chromosomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3218096

5 July 2018

Human centromeric DNAs.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-531

A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-531

The topology of early- and late-replicating chromatin in differentially decondensed chromosomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-531

Higher-order structure in pericentric heterochromatin involves a distinct pattern of histone modification and an RNA component

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-531

A strand-specific burst in transcription of pericentric satellites is required for chromocenter formation and early mouse development.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-531

ColorHOR--novel graphical algorithm for fast scan of alpha satellite higher-order repeats and HOR annotation for GenBank sequence of human genome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-531

The Mouse Genome Database genotypes::phenotypes

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-531

High-resolution mapping of interstitial telomeric repeats in Syrian hamster metaphase chromosomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-531

The structure and evolution of centromeric transition regions within the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-531

Hypervariable telomeric sequences from the human sex chromosomes are pseudoautosomal

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-531

The location of four human satellite DNAs on human chromosomes

21 January 2018

1 reference

12 December 2020

1 reference

12 December 2020

Organization of a repetitive human 1.8 kb KpnI sequence localized in the heterochromatin of chromosome 15

1 reference

12 December 2020

Mouse major (gamma) satellite DNA is highly conserved and organized into extremely long tandem arrays: implications for recombination between nonhomologous chromosomes

1 reference

12 December 2020

A variant family of mouse minor satellite located on the centromeric region of chromosome 2

1 reference

12 December 2020

Chromosomal localization of human satellites 2 and 3 by a FISH method using oligonucleotides as probes

1 reference

12 December 2020

Localisation of the classical DNA satellites on human chromosomes as determined by primed in situ labelling (PRINS)

1 reference

12 December 2020

A STUDY OF THE MITOTIC CHROMOSOMES OF MICE OF THE STRONG A LINE

1 reference

12 December 2020

High-resolution organization of mouse centromeric and pericentromeric DNA

1 reference

12 December 2020

Human satellite 3 (HS3) binding protein from the nuclear matrix: isolation and binding properties

1 reference

12 December 2020

Maintenance of heterochromatin by RNA interference of tandem repeats

1 reference

12 December 2020

Analysis of the centromeric regions of the human genome assembly

1 reference

12 December 2020

Long range periodicities in mouse satellite DNA

1 reference

12 December 2020

Partial sequence analysis of mouse satellite DNA evidence for short range periodicities

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2164-12-531

1 reference

Dimensions Publication ID

30 July 2017

1027689529

0 references

Fatcat ID

release_bdtntm6f3fafzhbnujwo2ypmxi

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/bdtntm6f3fafzhbnujwo2ypmxi

24 November 2022

mapped directly with Wikidata item

PMCID

3218096

1 reference

30 July 2017

1 reference