Repression of deoP2 in Escherichia coli by CytR: conversion of a transcription activator into a repressor (Q34082619)

30 July 2017

title

Repression of deoP2 in Escherichia coli by CytR: conversion of a transcription activator into a repressor (English)

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30 July 2017

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M Shin

1

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30 July 2017

S Kang

2

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30 July 2017

S J Hyun

3

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30 July 2017

N Fujita

4

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30 July 2017

A Ishihama

5

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30 July 2017

P Valentin-Hansen

6

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30 July 2017

H E Choy

7

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30 July 2017

language of work or name

English

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publication date

1 October 2001

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30 July 2017

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30 July 2017

volume

20

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30 July 2017

issue

19

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30 July 2017

page(s)

5392-5399

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The Escherichia coli RNA polymerase alpha subunit linker: length requirements for transcription activation at CRP-dependent promoters

30 July 2017

cites work

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5 July 2018

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Transcription activation by catabolite activator protein (CAP)

5 July 2018

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An inactive open complex mediated by an UP element at Escherichia coli promoters

5 July 2018

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5 July 2018

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Identification of an UP element consensus sequence for bacterial promoters

5 July 2018

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Transcription activation at Class II CRP-dependent promoters: identification of determinants in the C-terminal domain of the RNA polymerase alpha subunit.

5 July 2018

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Transcription activation at promoters carrying tandem DNA sites for the Escherichia coli cyclic AMP receptor protein: organisation of the RNA polymerase alpha subunits

5 July 2018

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Protein-protein contacts that activate and repress prokaryotic transcription

5 July 2018

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5 July 2018

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Flexible linker in the RNA polymerase alpha subunit facilitates the independent motion of the C-terminal activator contact domain.

5 July 2018

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Transcriptional activation by recruitment

5 July 2018

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Design of CytR regulated, cAMP-CRP dependent class II promoters in Escherichia coli: RNA polymerase-promoter interactions modulate the efficiency of CytR repression.

5 July 2018

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Transcription activation at class II CAP-dependent promoters

5 July 2018

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Transcription activation at class II CRP-dependent promoters: the role of different activating regions

5 July 2018

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The -45 region of the Escherichia coli lac promoter: CAP-dependent and CAP-independent transcription

5 July 2018

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Transcription activation at class II CAP-dependent promoters: two interactions between CAP and RNA polymerase

5 July 2018

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Transcription factor recognition surface on the RNA polymerase alpha subunit is involved in contact with the DNA enhancer element

5 July 2018

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Protein p4 represses phage phi 29 A2c promoter by interacting with the alpha subunit of Bacillus subtilis RNA polymerase.

5 July 2018

1 reference

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A flexible partnership: the CytR anti-activator and the cAMP-CRP activator protein, comrades in transcription control

5 July 2018

1 reference

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Location of the C-terminal domain of the RNA polymerase alpha subunit in different open complexes at the Escherichia coli galactose operon regulatory region

5 July 2018

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Orientation of functional activating regions in the Escherichia coli CRP protein during transcription activation at class II promoters

5 July 2018

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Protein-protein communication within the transcription apparatus

5 July 2018

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Identification of the functional subunit of a dimeric transcription activator protein by use of oriented heterodimers

5 July 2018

1 reference

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Characterization of promoter recognition complexes formed by CRP and CytR for repression and by CRP and RNA polymerase for activation of transcription on the Escherichia coli deoP2 promoter.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125655

Identification of the activating region of catabolite gene activator protein (CAP): isolation and characterization of mutants of CAP specifically defective in transcription activation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125655

RNA polymerase idling and clearance in gal promoters: use of supercoiled minicircle DNA template made in vivo

5 July 2018

1 reference

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A third recognition element in bacterial promoters: DNA binding by the alpha subunit of RNA polymerase

5 July 2018

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Factor independent activation of rrnB P1. An "extended" promoter with an upstream element that dramatically increases promoter strength

5 July 2018

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Domain organization of RNA polymerase alpha subunit: C-terminal 85 amino acids constitute a domain capable of dimerization and DNA binding.

5 July 2018

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Interactions between the cyclic AMP receptor protein and the alpha subunit of RNA polymerase at the Escherichia coli galactose operon P1 promoter

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125655

Interactions between the Escherichia coli cyclic AMP receptor protein and RNA polymerase at class II promoters

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125655

The functional subunit of a dimeric transcription activator protein depends on promoter architecture

5 July 2018

1 reference

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Structural map of the alpha subunit of Escherichia coli RNA polymerase: structural domains identified by proteolytic cleavage.

5 July 2018

1 reference

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Transcription activation at Escherichia coli promoters dependent on the cyclic AMP receptor protein: effects of binding sequences for the RNA polymerase alpha-subunit

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125655

Repression and activation of transcription by Gal and Lac repressors: involvement of alpha subunit of RNA polymerase

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125655

RNA polymerase alpha subunit binding site in positively controlled promoters: a new model for RNA polymerase-promoter interaction and transcriptional activation in the Escherichia coli ada and aidB genes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125655

Mechanism of CRP-cAMP activation of lac operon transcription initiation activation of the P1 promoter

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125655

Quantitative DNase footprint titration: a method for studying protein-DNA interactions

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125655

Mutations that alter the ability of the Escherichia coli cyclic AMP receptor protein to activate transcription.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125655

The CytR repressor antagonizes cyclic AMP-cyclic AMP receptor protein activation of the deoCp2 promoter of Escherichia coli K-12.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125655

The role of two surface exposed loops in transcription activation by the Escherichia coli CRP and FNR proteins.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125655

Escherichia coli catabolite gene activator protein mutants defective in positive control of lac operon transcription.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125655

A novel function of the cAMP-CRP complex in Escherichia coli: cAMP-CRP functions as an adaptor for the CytR repressor in the deo operon.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125655

Single amino acid substitutions in the cAMP receptor protein specifically abolish regulation by the CytR repressor in Escherichia coli

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125655

Spacing requirements for interactions between the C-terminal domain of the alpha subunit of Escherichia coli RNA polymerase and the cAMP receptor protein

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125655

Activation of prokaryotic transcription through arbitrary protein-protein contacts.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125655

Protein-protein interactions in gene regulation: the cAMP-CRP complex sets the specificity of a second DNA-binding protein, the CytR repressor.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125655

Location, structure, and function of the target of a transcriptional activator protein.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125655

Characterization of the activating region of Escherichia coli catabolite gene activator protein (CAP). I. Saturation and alanine-scanning mutagenesis.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125655

DNA-binding determinants of the alpha subunit of RNA polymerase: novel DNA-binding domain architecture

28 October 2018

1 reference

12 December 2020

Reiterative transcription initiation from galP2 promoter of Escherichia coli

1 reference

12 December 2020

Identification of the Subunit of cAMP Receptor Protein (CRP) That Functionally Interacts with CytR in CRP-CytR-mediated Transcriptional Repression

1 reference

12 December 2020

Bipartite functional map of the E. coli RNA polymerase α subunit: Involvement of the C-terminal region in transcription activation by cAMP-CRP

1 reference

12 December 2020

CAP, the -45 region, and RNA polymerase: three partners in transcription initiation at lacP1 in Escherichia coli

1 reference

12 December 2020

Dissection of a surface-exposed portion of the cAMP-CRP complex that mediates transcription activation and repression

1 reference

12 December 2020

Identifiers

DOI

10.1093/EMBOJ/20.19.5392

1 reference

30 July 2017

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30 July 2017

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