Copy number analysis identifies novel interactions between genomic loci in ovarian cancer (Q34117394)

31 July 2017

Copy number analysis identifies novel interactions between genomic loci in ovarian cancer (English)

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31 July 2017

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1

Kylie L Gorringe

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31 July 2017

Joshy George

2

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Michael S Anglesio

Michael S Anglesio

3

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Ian G. Campbell

Ian G Campbell

14

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Gordon K Smyth

Gordon K Smyth

13

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David Bowtell

15

David D L Bowtell

1 reference

31 July 2017

6

Prue Cowin

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31 July 2017

11

Aikou Okamoto

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31 July 2017

4

Manasa Ramakrishna

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31 July 2017

Dariush Etemadmoghadam

5

Dariush Etemadmoghadam

1 reference

31 July 2017

7

Anita Sridhar

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31 July 2017

9

Samantha E Boyle

1 reference

Australian Ovarian Cancer Study

31 July 2017

16

Australian Ovarian Cancer Study

1 reference

31 July 2017

Louise H Williams

8

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31 July 2017

Nozomu Yanaihara

10

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31 July 2017

Mitsuyoshi Urashima

12

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31 July 2017

language of work or name

English

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publication date

10 September 2010

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31 July 2017

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31 July 2017

5

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31 July 2017

9

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31 July 2017

e815

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Creative Commons Attribution 4.0 International

31 July 2017

start time

10 September 2010

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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BCL9 promotes tumor progression by conferring enhanced proliferative, metastatic, and angiogenic properties to cancer cells

5 July 2018

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Identification of novel gene amplifications in breast cancer and coexistence of gene amplification with an activating mutation of PIK3CA

5 July 2018

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A network model of a cooperative genetic landscape in brain tumors

5 July 2018

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High-resolution analysis of copy number alterations and associated expression changes in ovarian tumors

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2937017

Integrated genome-wide DNA copy number and expression analysis identifies distinct mechanisms of primary chemoresistance in ovarian carcinomas

5 July 2018

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Neurofibromin 1 (NF1) defects are common in human ovarian serous carcinomas and co-occur with TP53 mutations

5 July 2018

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Comprehensive genomic characterization defines human glioblastoma genes and core pathways

5 July 2018

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Novel molecular subtypes of serous and endometrioid ovarian cancer linked to clinical outcome

5 July 2018

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Identification of somatically acquired rearrangements in cancer using genome-wide massively parallel paired-end sequencing

5 July 2018

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Estimation and assessment of raw copy numbers at the single locus level

5 July 2018

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Assessing the significance of chromosomal aberrations in cancer: methodology and application to glioma

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2937017

Characterizing the cancer genome in lung adenocarcinoma

5 July 2018

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The genomic landscapes of human breast and colorectal cancers

5 July 2018

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High-resolution aCGH and expression profiling identifies a novel genomic subtype of ER negative breast cancer

5 July 2018

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Amplification of PVT1 contributes to the pathophysiology of ovarian and breast cancer.

5 July 2018

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A common genetic risk factor for colorectal and prostate cancer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2937017

Amplification of MDS1/EVI1 and EVI1, located in the 3q26.2 amplicon, is associated with favorable patient prognosis in ovarian cancer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2937017

Combined loss of Hey1 and HeyL causes congenital heart defects because of impaired epithelial to mesenchymal transition

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2937017

A family of human microRNA genes from miniature inverted-repeat transposable elements

5 July 2018

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A faster circular binary segmentation algorithm for the analysis of array CGH data

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2937017

Novel patterns of genome rearrangement and their association with survival in breast cancer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2937017

The consensus coding sequences of human breast and colorectal cancers

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2937017

High-resolution analysis of chromosomal breakpoints and genomic instability identifies PTPRD as a candidate tumor suppressor gene in neuroblastoma

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2937017

High resolution genomic analysis of sporadic breast cancer using array-based comparative genomic hybridization

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2937017

Amplification of EMSY, a novel oncogene on 11q13, in high grade ovarian surface epithelial carcinomas

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2937017

Genomic and gene expression profiling of minute alterations of chromosome arm 1p in small-cell lung carcinoma cells.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2937017

Analysis of ovarian cancer cell lines using array-based comparative genomic hybridization.

5 July 2018

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Circular binary segmentation for the analysis of array-based DNA copy number data

5 July 2018

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EMSY links the BRCA2 pathway to sporadic breast and ovarian cancer

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2937017

Differentially regulated genes as putative targets of amplifications at 20q in ovarian cancers

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2937017

Progenetix.net: an online repository for molecular cytogenetic aberration data

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2937017

BRD4 bromodomain gene rearrangement in aggressive carcinoma with translocation t(15;19)

5 July 2018

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Mutational analysis of the APC/beta-catenin/Tcf pathway in colorectal cancer.

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2937017

The gene encoding bone morphogenetic protein 8B is required for the initiation and maintenance of spermatogenesis in the mouse

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2937017

An ovarian tumor marker with homology to vaccinia virus contains an IgV-like region and multiple transmembrane domains

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2937017

Coexistence of copy number increases of c-Myc, ZNF217, CCND1, ErbB1 and ErbB2 in ovarian cancers.

5 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0011408

Are there any more ovarian tumor suppressor genes? A new perspective using ultra high-resolution copy number and loss of heterozygosity analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0011408

High-resolution single nucleotide polymorphism array analysis of epithelial ovarian cancer reveals numerous microdeletions and amplifications

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0011408

Tumor cell type can be reproducibly diagnosed and is of independent prognostic significance in patients with maximally debulked ovarian carcinoma.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0011408

RAF/RAS oncogenes and mismatch-repair status

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0011408

Carcinoma of the ovary. FIGO 26th Annual Report on the Results of Treatment in Gynecological Cancer.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2937017

Ovarian carcinoma develops through multiple modes of chromosomal evolution.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2937017

Mapping of DNA amplifications at 15 chromosomal localizations in 1875 breast tumors: definition of phenotypic groups

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2937017

Parallel analysis of sporadic primary ovarian carcinomas by spectral karyotyping, comparative genomic hybridization, and expression microarrays

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2937017

L-myc, a new myc-related gene amplified and expressed in human small cell lung cancer

28 October 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0011408

A PDGFRB-positive acute myeloid malignancy with a new t(5;12)(q33;p13.3) involving the ERC1 gene

21 January 2018

1 reference

12 December 2020

Whole genome oligonucleotide-based array comparative genomic hybridization analysis identified fibroblast growth factor 1 as a prognostic marker for advanced-stage serous ovarian adenocarcinomas

1 reference

12 December 2020

High-resolution copy number arrays in cancer and the problem of normal genome copy number variation

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12 December 2020

Analysis of cytogenetic alterations in stage III serous ovarian adenocarcinoma reveals a heterogeneous group regarding survival, surgical outcome, and substage

1 reference

12 December 2020

Comparative genomic hybridization detects genetic imbalances in primary ovarian carcinomas as correlated with grade of differentiation

1 reference

12 December 2020

Amplicon profiles in ovarian serous carcinomas

1 reference

12 December 2020

10.1371/JOURNAL.PONE.0011408

Identifiers

DOI

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31 July 2017

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31 July 2017

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