Binding linkage in a telomere DNA-protein complex at the ends of Oxytricha nova chromosomes. (Q34125741)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15967465%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

title

Binding linkage in a telomere DNA-protein complex at the ends of Oxytricha nova chromosomes (English)

1 reference

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13 January 2020

author name string

Pawel Buczek

1

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13 January 2020

Rochelle S Orr

2

1 reference

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13 January 2020

Mili Shum

4

1 reference

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13 January 2020

Emily Kimmel

5

1 reference

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13 January 2020

Shawn E Gerum

7

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13 January 2020

Martin P Horvath

8

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13 January 2020

language of work or name

English

0 references

publication date

1 July 2005

1 reference

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Journal of Molecular Biology

13 January 2020

published in

1 reference

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13 January 2020

volume

350

1 reference

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13 January 2020

issue

5

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13 January 2020

page(s)

938-952

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POT1 and TRF2 cooperate to maintain telomeric integrity

13 January 2020

cites work

1 reference

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Homologous recombination generates T-loop-sized deletions at human telomeres

28 July 2018

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Prediction of multiple tandem OB-fold domains in telomere end-binding proteins Pot1 and Cdc13.

28 July 2018

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Closed chromatin loops at the ends of chromosomes

28 July 2018

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PTOP interacts with POT1 and regulates its localization to telomeres

28 July 2018

1 reference

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T-loops and the origin of telomeres

28 July 2018

1 reference

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DNA binding features of human POT1: a nonamer 5'-TAGGGTTAG-3' minimal binding site, sequence specificity, and internal binding to multimeric sites

28 July 2018

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DNA self-recognition in the structure of Pot1 bound to telomeric single-stranded DNA

28 July 2018

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The structure of telomeric DNA.

28 July 2018

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POT1 as a terminal transducer of TRF1 telomere length control

28 July 2018

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Cooperative binding of single-stranded telomeric DNA by the Pot1 protein of Schizosaccharomyces pombe

28 July 2018

1 reference

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Crystal structure of the potassium form of an Oxytricha nova G-quadruplex

28 July 2018

1 reference

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Crystal structure of parallel quadruplexes from human telomeric DNA

28 July 2018

1 reference

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Senescence Induced by Altered Telomere State, Not Telomere Loss

28 July 2018

1 reference

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Dimeric structure of the Oxytricha nova telomere end-binding protein alpha-subunit bound to ssDNA

28 July 2018

1 reference

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Crystal structure of the N-terminal domain of Oxytricha nova telomere end-binding protein alpha subunit both uncomplexed and complexed with telomeric ssDNA

28 July 2018

1 reference

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T-loop assembly in vitro involves binding of TRF2 near the 3' telomeric overhang

28 July 2018

1 reference

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DNA G-quartets in a 1.86 A resolution structure of an Oxytricha nova telomeric protein-DNA complex

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

Pot1, the putative telomere end-binding protein in fission yeast and humans

28 July 2018

1 reference

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Mammalian telomeres end in a large duplex loop

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

Crystal structure of the Oxytricha nova telomere end binding protein complexed with single strand DNA

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

Rap1 protein regulates telomere turnover in yeast

28 July 2018

1 reference

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Telomerase and chromosome end maintenance.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

Modulation of telomerase activity by telomere DNA-binding proteins in Oxytricha

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

TRF2 Protects Human Telomeres from End-to-End Fusions

28 July 2018

1 reference

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Extension of life-span by introduction of telomerase into normal human cells

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

Human telomeres contain two distinct Myb-related proteins, TRF1 and TRF2

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

The terminal DNA structure of mammalian chromosomes

28 July 2018

1 reference

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Solution conformations and interactions of alpha and beta subunits of the Oxytricha nova telomere binding protein: investigation by Raman spectroscopy

28 July 2018

1 reference

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TRF1 is a dimer and bends telomeric DNA

28 July 2018

1 reference

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The Saccharomyces CDC13 protein is a single-strand TG1-3 telomeric DNA-binding protein in vitro that affects telomere behavior in vivo

28 July 2018

1 reference

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The roles of telomeres and telomerase in cell life span

28 July 2018

1 reference

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Oxytricha telomere-binding protein: separable DNA-binding and dimerization domains of the alpha-subunit

28 July 2018

1 reference

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OB(oligonucleotide/oligosaccharide binding)-fold: common structural and functional solution for non-homologous sequences

28 July 2018

1 reference

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Telomeric protein-DNA point contacts identified by photo-cross-linking using 5-bromodeoxyuridine

28 July 2018

1 reference

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Photocrosslinking of 5-iodouracil-substituted RNA and DNA to proteins

28 July 2018

1 reference

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Modeling studies of the change in conformation required for cleavage of limited proteolytic sites

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

All gene-sized DNA molecules in four species of hypotrichs have the same terminal sequence and an unusual 3' terminus

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

Telomeric DNA-protein interactions of Oxytricha macronuclear DNA.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

Escherichia coli aspartate transcarbamylase: the relation between structure and function

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

An overhanging 3' terminus is a conserved feature of telomeres

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

Calculation of protein extinction coefficients from amino acid sequence data

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

Telomeric DNA dimerizes by formation of guanine tetrads between hairpin loops

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

Molecular recognition. Conformational analysis of limited proteolytic sites and serine proteinase protein inhibitors

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

Cloning and expression of genes for the Oxytricha telomere-binding protein: specific subunit interactions in the telomeric complex

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

Structure and function of telomeres

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

Telomere shortening associated with chromosome instability is arrested in immortal cells which express telomerase activity

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

Quadruplex structure of Oxytricha telomeric DNA oligonucleotides

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

Euplotes crassus has genes encoding telomere-binding proteins and telomere-binding protein homologs

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

The telomere hypothesis of cellular aging

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

PH dependence of the Adair constants of human hemoglobin. Nonuniform contribution of successive oxygen bindings to the alkaline Bohr effect

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

Structure of human POT1 bound to telomeric single-stranded DNA provides a model for chromosome end-protection

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

Homology among telomeric end-protection proteins

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

Conserved structure for single-stranded telomeric DNA recognition

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

Telomere states and cell fates

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

Saccharomyces cerevisiae RAP1 binds to telomeric sequences with spatial flexibility

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

Identification of human Rap1: implications for telomere evolution

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

Oxytricha telomere-binding protein: DNA-dependent dimerization of the alpha and beta subunits

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

RAP1 and telomere structure regulate telomere position effects in Saccharomyces cerevisiae.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

Phosphorylation of theOxytrichatelomere protein: possible cell cycle regulation

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2939017

Correlation between sites of limited proteolysis and segmental mobility in thermolysin

28 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15967465

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Telomere proteins: specific recognition and protection of the natural termini of Oxytricha macronuclear DNA

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15967465

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.JMB.2005.05.040

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15967465%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15967465%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

PubMed publication ID

15967465

1 reference