Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops (Q34144559)

31 July 2017

Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops (English)

1 reference

31 July 2017

Tatsuya Maehigashi

1

1 reference

31 July 2017

Jack A Dunkle

series ordinal

2

1 reference

31 July 2017

Stacey J Miles

series ordinal

3

1 reference

31 July 2017

Christine M Dunham

series ordinal

4

1 reference

31 July 2017

language of work or name

English

0 references

publication date

15 August 2014

1 reference

Proceedings of the National Academy of Sciences of the United States of America

31 July 2017

1 reference

31 July 2017

111

1 reference

31 July 2017

35

1 reference

31 July 2017

12740-12745

1 reference

Structure of the ribosome with elongation factor G trapped in the pretranslocation state

31 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Mechanisms and implications of programmed translational frameshifting

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

A new understanding of the decoding principle on the ribosome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

How mutations in tRNA distant from the anticodon affect the fidelity of decoding

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Structural aspects of messenger RNA reading frame maintenance by the ribosome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Features and development of Coot

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

PHENIX: a comprehensive Python-based system for macromolecular structure solution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

What recent ribosome structures have revealed about the mechanism of translation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

A sequence element that tunes Escherichia coli tRNA(Ala)(GGC) to ensure accurate decoding.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

A gripping tale of ribosomal frameshifting: extragenic suppressors of frameshift mutations spotlight P-site realignment

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Quality control by the ribosome following peptide bond formation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Mechanism for expanding the decoding capacity of transfer RNAs by modification of uridines

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Structures of tRNAs with an expanded anticodon loop in the decoding center of the 30S ribosomal subunit

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

tRNA's wobble decoding of the genome: 40 years of modification

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Structure of the 70S ribosome complexed with mRNA and tRNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

tRNA residues that have coevolved with their anticodon to ensure uniform and accurate codon recognition.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Structures of the bacterial ribosome at 3.5 A resolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

An active role for tRNA in decoding beyond codon:anticodon pairing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

The modified wobble nucleoside uridine-5-oxyacetic acid in tRNAPro(cmo5UGG) promotes reading of all four proline codons in vivo

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Exploring the limits of codon and anticodon size

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Improvement of reading frame maintenance is a common function for several tRNA modifications

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Recognition of cognate transfer RNA by the 30S ribosomal subunit

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Expanding the genetic code: selection of efficient suppressors of four-base codons and identification of "shifty" four-base codons with a library approach in Escherichia coli

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

A new model for phenotypic suppression of frameshift mutations by mutant tRNAs.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Genetic dissection of synthesis and function of modified nucleosides in bacterial transfer RNA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Ribosome binding of DNA analogs of tRNA requires base modifications and supports the "extended anticodon".

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Nucleotide sequence of the SUF2 frameshift suppressor gene of Saccharomyces cerevisiae

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Codon recognition during frameshift suppression in Saccharomyces cerevisiae

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

The yeast frameshift suppressor gene SUF16-1 encodes an altered glycine tRNA containing the four-base anticodon 3'-CCCG-5'

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

5 July 2018

Frameshift suppression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Suppressor sufJ: a novel type of tRNA mutant that induces translational frameshifting

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

External suppression of a frameshift mutant in salmonella.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Frameshift Suppression: a Nucleotide Addition in the Anticodon of a Glycine Transfer RNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Frameshift suppressors. 3. Effects of suppressor mutations on transfer RNA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Frameshift suppressors. II. Genetic mapping and dominance studies.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Externally suppressible +1 "glycine" frameshift: possible quadruplet isomers for glycine and proline.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Suppressors of frameshift mutations in Salmonella typhimurium.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Reading frame selection and transfer RNA anticodon loop stacking.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Influence of modification next to the anticodon in tRNA on codon context sensitivity of translational suppression and accuracy

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Missense and nonsense suppressors can correct frameshift mutations.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Processivity errors of gene expression in Escherichia coli.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Insertion (sufB) in the anticodon loop or base substitution (sufC) in the anticodon stem of tRNAPro2fromSalmonella typhimuriuminduces suppression of frameshift mutations

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Translational accuracy and the fitness of bacteria

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Studies of the complex between transfer RNAs with complementary anticodons. I. Origins of enhanced affinity between complementary triplets

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

A Salmonella frameshift suppressor that acts at runs of A residues in the messenger RNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Normal tRNAs promote ribosomal frameshifting

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Assembly of the mitochondrial membrane system: sequences of yeast mitochondrial valine and an unusual threonine tRNA gene

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Mistranslation in E. coli

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Crystallization of the Fab from a human monoclonal antibody against gp 41 of human immunodeficiency virus type I.

5 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1409436111

Restoration of In-phase Translation by an Unlinked Suppressor of a Frameshift Mutation in Salmonella typhimurium

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1409436111

Four-base codons ACCA, ACCU and ACCC are recognized by frameshift suppressor sufJ

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1409436111

Quadruplet codons: implications for code expansion and the specification of translation step size

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1409436111

Prevention of translational frameshifting by the modified nucleoside 1-methylguanosine.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1409436111

Deficiency of 1-methylguanosine in tRNA from Salmonella typhimurium induces frameshifting by quadruplet translocation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1409436111

The ribosomal grip of the peptidyl-tRNA is critical for reading frame maintenance.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1409436111

Translocation of a tRNA with an extended anticodon through the ribosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1409436111

Recognition and positioning of mRNA in the ribosome by tRNAs with expanded anticodons.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1409436111

Codon-specific missense errors in vivo.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4156745

Structural rearrangements of the ribosome at the tRNA proofreading step

28 October 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1409436111

Screen for Human Tumour Viruses

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1409436111

Evidence for Single Copies of Globin Genes in the Mouse Genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1409436111

Tryptophan tRNA of Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1409436111

21 January 2018

Identifiers

DOI

10.1073/PNAS.1409436111

1 reference

31 July 2017

0 references

1 reference

31 July 2017

1 reference