The iStem, a long-range RNA secondary structure element required for efficient exon inclusion in the Drosophila Dscam pre-mRNA. (Q34150831)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16287842%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

title

The iStem, a long-range RNA secondary structure element required for efficient exon inclusion in the Drosophila Dscam pre-mRNA (English)

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9 January 2020

2

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9 January 2020

author name string

Jenny M Kreahling

series ordinal

1

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9 January 2020

language of work or name

English

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publication date

1 December 2005

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16287842%20AND%20SRC:MED&resulttype=core&format=json

Molecular and Cellular Biology

9 January 2020

published in

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9 January 2020

volume

25

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9 January 2020

issue

23

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9 January 2020

page(s)

10251-10260

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Mutually exclusive splicing of the insect Dscam pre-mRNA directed by competing intronic RNA secondary structures

9 January 2020

cites work

1 reference

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Extensive diversity of Ig-superfamily proteins in the immune system of insects

28 July 2018

1 reference

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Influence of RNA secondary structure on the pre-mRNA splicing process

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1291239

Identification of alternative splicing regulators by RNA interference in Drosophila

28 July 2018

1 reference

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The organization and evolution of the dipteran and hymenopteran Down syndrome cell adhesion molecule (Dscam) genes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1291239

Alternative splicing of Drosophila Dscam generates axon guidance receptors that exhibit isoform-specific homophilic binding

28 July 2018

1 reference

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WebLogo: A Sequence Logo Generator

28 July 2018

1 reference

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Compensatory evolution of a precursor messenger RNA secondary structure in the Drosophila melanogaster Adh gene

28 July 2018

1 reference

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Roles of hnRNP A1, SR proteins, and p68 helicase in c-H-ras alternative splicing regulation

28 July 2018

1 reference

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Structure and evolution of neurexin genes: insight into the mechanism of alternative splicing

28 July 2018

1 reference

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Analysis of the human neurexin genes: alternative splicing and the generation of protein diversity

28 July 2018

1 reference

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Drosophila Dscam is required for divergent segregation of sister branches and suppresses ectopic bifurcation of axons

28 July 2018

1 reference

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NCIR: a database of non-canonical interactions in known RNA structures

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1291239

Alternative splicing of the Drosophila Dscam pre-mRNA is both temporally and spatially regulated

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1291239

Alternative splicing: increasing diversity in the proteomic world

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1291239

Positive and negative intronic regulatory elements control muscle-specific alternative exon splicing of Drosophila myosin heavy chain transcripts.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1291239

Protein diversity from alternative splicing: a challenge for bioinformatics and post-genome biology

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1291239

Drosophila Dscam is an axon guidance receptor exhibiting extraordinary molecular diversity

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1291239

Intron self-complementarity enforces exon inclusion in a yeast pre-mRNA

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1291239

Splice-junction elements and intronic sequences regulate alternative splicing of the Drosophila myosin heavy chain gene transcript.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1291239

Intramolecular structure in yeast introns aids the early steps of in vitro spliceosome assembly.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1291239

Conserved alternative splicing patterns and splicing signals in the Drosophila sodium channel gene para.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1291239

Molecular analysis of the para locus, a sodium channel gene in Drosophila

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1291239

Functional domains of the Drosophila melanogaster muscle myosin heavy-chain gene are encoded by alternatively spliced exons

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1291239

Myosin functional domains encoded by alternative exons are expressed in specific thoracic muscles of Drosophila

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1291239

Unexpected point mutations activate cryptic 3' splice sites by perturbing a natural secondary structure within a yeast intron

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1291239

Analysis of Dscam diversity in regulating axon guidance in Drosophila mushroom bodies

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1291239

Stochastic yet biased expression of multiple Dscam splice variants by individual cells

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1291239

Axonal targeting of olfactory receptor neurons in Drosophila is controlled by Dscam

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1291239

p68 RNA helicase is an essential human splicing factor that acts at the U1 snRNA-5' splice site duplex

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1291239

Molecular phylogeny and divergence times of drosophilid species

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1291239

Tissue-specific splicing in vivo of the beta-tropomyosin gene: dependence on an RNA secondary structure

28 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16287842

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1128/MCB.25.23.10251-10260.2005

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16287842%20AND%20SRC:MED&resulttype=core&format=json

9 January 2020

1 reference

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9 January 2020

PubMed publication ID

16287842

1 reference