Okazaki fragment maturation in yeast. I. Distribution of functions between FEN1 AND DNA2. (Q34158344)

31 July 2017

Okazaki fragment maturation in yeast. I. Distribution of functions between FEN1 AND DNA2. (English)

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DNA replication, removal of RNA primer

31 July 2017

1 reference

Gene Ontology release 2020-05-02

Rao Ayyagari

1

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31 July 2017

Xavier V Gomes

series ordinal

2

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31 July 2017

Dmitry A Gordenin

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3

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31 July 2017

Peter M J Burgers

series ordinal

4

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31 July 2017

language of work or name

English

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publication date

6 November 2002

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Journal of Biological Chemistry

31 July 2017

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31 July 2017

278

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31 July 2017

3

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31 July 2017

1618-1625

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Enzymes and reactions at the eukaryotic DNA replication fork

31 July 2017

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Mutational spectrum analysis of RNase H(35) deficient Saccharomyces cerevisiae using fluorescence-based directed termination PCR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

DNA2 encodes a DNA helicase essential for replication of eukaryotic chromosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

A yeast replicative helicase, Dna2 helicase, interacts with yeast FEN-1 nuclease in carrying out its essential function

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Dna2 of Saccharomyces cerevisiae possesses a single-stranded DNA-specific endonuclease activity that is able to act on double-stranded DNA in the presence of ATP.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

The endonuclease activity of the yeast Dna2 enzyme is essential in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

The nuclease activity of the yeast DNA2 protein, which is related to the RecB-like nucleases, is essential in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Accumulation of single-stranded DNA and destabilization of telomeric repeats in yeast mutant strains carrying a deletion of RAD27.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Dynamic localization of an Okazaki fragment processing protein suggests a novel role in telomere replication

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Second pathway for completion of human DNA base excision-repair: reconstitution with purified proteins and requirement for DNase IV (FEN1).

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Involvement of flap endonuclease 1 in base excision DNA repair.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Molecular mechanism of PCNA-dependent base excision repair

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Requirement of the yeast RTH1 5' to 3' exonuclease for the stability of simple repetitive DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Destabilization of yeast micro- and minisatellite DNA sequences by mutations affecting a nuclease involved in Okazaki fragment processing (rad27) and DNA polymerase delta (pol3-t).

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Novel function of Rad27 (FEN-1) in restricting short-sequence recombination

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Identification of rad27 mutations that confer differential defects in mutation avoidance, repeat tract instability, and flap cleavage

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

DNA ligase I competes with FEN1 to expand repetitive DNA sequences in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Role of yeast Rth1 nuclease and its homologs in mutation avoidance, DNA repair, and DNA replication

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Homologous recombination is required for the viability of rad27 mutants

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Identification and characterization of Saccharomyces cerevisiae EXO1, a gene encoding an exonuclease that interacts with MSH2

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Lagging strand DNA synthesis at the eukaryotic replication fork involves binding and stimulation of FEN-1 by proliferating cell nuclear antigen

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Mutations in yeast proliferating cell nuclear antigen define distinct sites for interaction with DNA polymerase delta and DNA polymerase epsilon

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Cleavage specificity of Saccharomyces cerevisiae flap endonuclease 1 suggests a double-flap structure as the cellular substrate

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Structure of the DNA repair and replication endonuclease and exonuclease FEN-1: coupling DNA and PCNA binding to FEN-1 activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

The crystal structure of flap endonuclease-1 from Methanococcus jannaschii

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Calf 5' to 3' exo/endonuclease must slide from a 5' end of the substrate to perform structure-specific cleavage

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Contacts between the 5' nuclease of DNA polymerase I and its DNA substrate.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

RPA governs endonuclease switching during processing of Okazaki fragments in eukaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Okazaki fragment processing: modulation of the strand displacement activity of DNA polymerase delta by the concerted action of replication protein A, proliferating cell nuclear antigen, and flap endonuclease-1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Structure and processivity of two forms of Saccharomyces cerevisiae DNA polymerase delta

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Overproduction in Escherichia coli and characterization of yeast replication factor C lacking the ligase homology domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Two modes of FEN1 binding to PCNA regulated by DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Rapid bacteriophage sedimentation in the presence of polyethylene glycol and its application to large-scale virus purification

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

DNA ligase I is recruited to sites of DNA replication by an interaction with proliferating cell nuclear antigen: identification of a common targeting mechanism for the assembly of replication factories

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

DNA ligase I selectively affects DNA synthesis by DNA polymerases delta and epsilon suggesting differential functions in DNA replication and repair

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Interaction between PCNA and DNA ligase I is critical for joining of Okazaki fragments and long-patch base-excision repair

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

DNA ligase I and proliferating cell nuclear antigen form a functional complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Assembly of DNA polymerase delta and epsilon holoenzymes depends on the geometry of the DNA template

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Rapid assembly of the bacteriophage T4 core replication complex on a linear primer/template construct

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Okazaki fragment maturation in yeast. II. Cooperation between the polymerase and 3'-5'-exonuclease activities of Pol delta in the creation of a ligatable nick

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

PCNA binding through a conserved motif

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

A novel role in DNA metabolism for the binding of Fen1/Rad27 to PCNA and implications for genetic risk.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Replication dynamics of the yeast genome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Reconstitution of proliferating cell nuclear antigen-dependent repair of apurinic/apyrimidinic sites with purified human proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Bacteriophage T4 RNase H removes both RNA primers and adjacent DNA from the 5' end of lagging strand fragments

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Binding properties of replication protein A from human and yeast cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

A novel mutation avoidance mechanism dependent on S. cerevisiae RAD27 is distinct from DNA mismatch repair

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Characterization of the Enzymatic Properties of the Yeast Dna2 Helicase/Endonuclease Suggests a New Model for Okazaki Fragment Processing

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Overexpression of multisubunit replication factors in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

RNA template-dependent 5' nuclease activity of Thermus aquaticus and Thermus thermophilus DNA polymerases

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

Chromosomal ARS1 has a single leading strand start site

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M209801200

21 January 2018

Identifiers

DOI

10.1074/JBC.M209801200

1 reference

31 July 2017

1 reference