Role of hydrophobicity and solvent-mediated charge-charge interactions in stabilizing alpha-helices (Q34169469)

31 July 2017

Role of hydrophobicity and solvent-mediated charge-charge interactions in stabilizing alpha-helices (English)

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31 July 2017

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5

H A Scheraga

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31 July 2017

J A Vila

1

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31 July 2017

D R Ripoll

series ordinal

2

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31 July 2017

M E Villegas

series ordinal

3

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31 July 2017

Y N Vorobjev

series ordinal

4

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31 July 2017

language of work or name

English

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publication date

1 December 1998

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31 July 2017

10

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based on heuristic

inferred from page(s)

published in

Biophysical Journal

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31 July 2017

75

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31 July 2017

6

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31 July 2017

2637-2646

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New developments of the electrostatically driven Monte Carlo method: test on the membrane-bound portion of melittin

31 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299939

Comparison of straight chain and cyclic unnatural amino acids embedded in the core of staphylococcal nuclease

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299939

Coupling between folding and ionization equilibria: effects of pH on the conformational preferences of polypeptides.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299939

Template-nucleated alanine-lysine helices are stabilized by position-dependent interactions between the lysine side chain and the helix barrel

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299939

Helix propensities of the amino acids measured in alanine-based peptides without helix-stabilizing side-chain interactions.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299939

N- and C-capping preferences for all 20 amino acids in alpha-helical peptides

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299939

Solvent-accessible surfaces of proteins and nucleic acids

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299939

Conformational studies of poly-L-alanine in water.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299939

The formation and stabilization of protein structure

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299939

On the multiple-minima problem in the conformational analysis of polypeptides. II. An electrostatically driven Monte Carlo method--tests on poly(L-alanine).

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299939

Helix signals in proteins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299939

Unusually stable helix formation in short alanine-based peptides

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299939

The multiple-minima problem in the conformational analysis of polypeptides. III. An electrostatically driven Monte Carlo method: tests on enkephalin.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299939

Beta-turns and their distortions: a proposed new nomenclature

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299939

The helical s constant for alanine in water derived from template-nucleated helices

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299939

Empirical solvation models can be used to differentiate native from near-native conformations of bovine pancreatic trypsin inhibitor

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299939

The intrinsic helix-forming tendency of L-alanine

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299939

The Protein Data Bank: a computer-based archival file for macromolecular structures

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299939

Influence of local interactions on protein structure. I. Conformational energy studies of N-acetyl-N'-methylamides of Pro-X and X-Pro dipeptides

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299939

Conformational analysis of the 20 naturally occurring amino acid residues using ECEPP

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299939

Local interactions in bends of proteins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299939

Handedness of crossover connections in beta sheets

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299939

Helix-Coil Stability Constants for the Naturally Occurring Amino Acids in Water. 11. Lysine Parameters from Random Poly(hydroxybutylglutamine-co-L-lysine)

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299939

Relative helix-forming tendencies of nonpolar amino acids

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299939

A thermodynamic scale for the helix-forming tendencies of the commonly occurring amino acids

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299939

Studies of synthetic helical peptides using circular dichroism and nuclear magnetic resonance

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299939

Analytical molecular surface calculation

28 October 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2898%2977709-4

Physical reasons for secondary structure stability: alpha-helices in short peptides

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2898%2977709-4

A theory of protein molecule self-organization. IV. Helical and irregular local structures of unfolded protein chains

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2898%2977709-4

Contact Electron‐Spin Coupling of Nuclear Magnetic Moments

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2898%2977709-4

Side chain contributions to the stability of alpha-helical structure in peptides

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2898%2977709-4

Contribution of unusual arginine-arginine short-range interactions to stabilization and recognition in proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2898%2977709-4

Effect of central-residue replacements on the helical stability of a monomeric peptide

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2898%2977709-4

Equation of State Calculations by Fast Computing Machines

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2898%2977709-4

Theory of the Phase Transition between Helix and Random Coil in Polypeptide Chains

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2898%2977709-4

10.1016/S0006-3495(98)77709-4

7 January 2021

Identifiers

DOI

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31 July 2017

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31 July 2017

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