Trans-splicing in trypanosomes: machinery and its impact on the parasite transcriptome (Q34180921)

31 July 2017

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title

Trans-splicing in trypanosomes: machinery and its impact on the parasite transcriptome (English)

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31 July 2017

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Shulamit Michaeli

1

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31 July 2017

language of work or name

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1 April 2011

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31 July 2017

number of pages

16

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based on heuristic

inferred from page(s)

published in

Future Microbiology

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31 July 2017

volume

6

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31 July 2017

issue

4

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31 July 2017

page(s)

459-474

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The genome of the kinetoplastid parasite, Leishmania major

31 July 2017

cites work

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A new twist in trypanosome RNA metabolism: cis-splicing of pre-mRNA.

21 January 2018

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Genome-wide analysis of mRNA abundance in two life-cycle stages of Trypanosoma brucei and identification of splicing and polyadenylation sites

21 January 2018

1 reference

The Transcriptome of the Human Pathogen Trypanosoma brucei at Single-Nucleotide Resolution

21 January 2018

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Transcripts coding for variant surface glycoproteins of Trypanosoma brucei have a short, identical exon at their 5' end.

21 January 2018

1 reference

Trans splicing of nuclear pre-mRNAs

21 January 2018

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trans and cis splicing in trypanosomatids: mechanism, factors, and regulation

21 January 2018

1 reference

A trans-spliced leader sequence on actin mRNA in C. elegans

21 January 2018

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A spliced leader is present on a subset of mRNAs from the human parasite Schistosoma mansoni

21 January 2018

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mRNA 5'-leader trans-splicing in the chordates

21 January 2018

1 reference

Spliced leader RNA trans-splicing in dinoflagellates

21 January 2018

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Conserved sequences in the U2 snRNA-encoding genes of Kinetoplastida do not include the putative branchpoint recognition region

21 January 2018

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Characterization of a candidate Trypanosoma brucei U1 small nuclear RNA gene.

21 January 2018

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The U5 RNA of trypanosomes deviates from the canonical U5 RNA: the Leptomonas collosoma U5 RNA and its coding gene

21 January 2018

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Interaction of U6 snRNA with a sequence required for function of the nematode SL RNA in trans-splicing

21 January 2018

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The pre-mRNA splicing machinery of trypanosomes: complex or simplified?

21 January 2018

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Sm core variation in spliceosomal small nuclear ribonucleoproteins from Trypanosoma brucei

21 January 2018

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Identification of novel snRNA-specific Sm proteins that bind selectively to U2 and U4 snRNAs in Trypanosoma brucei

21 January 2018

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Essential role of a trypanosome U4-specific Sm core protein in small nuclear ribonucleoprotein assembly and splicing

21 January 2018

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Establishment of an in vitro trans-splicing system in Trypanosoma brucei that requires endogenous spliced leader RNA.

21 January 2018

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Spliced leader trapping reveals widespread alternative splicing patterns in the highly dynamic transcriptome of Trypanosoma brucei.

21 January 2018

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Four histone variants mark the boundaries of polycistronic transcription units in Trypanosoma brucei

21 January 2018

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Trypanosome spliced leader RNA genes contain the first identified RNA polymerase II gene promoter in these organisms

21 January 2018

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Transcription of the Trypanosoma brucei spliced leader RNA gene is dependent only on the presence of upstream regulatory elements

21 January 2018

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Characterization of a multisubunit transcription factor complex essential for spliced-leader RNA gene transcription in Trypanosoma brucei

21 January 2018

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Trypanosomal TBP functions with the multisubunit transcription factor tSNAP to direct spliced-leader RNA gene expression

21 January 2018

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RNA polymerase transcription machinery in trypanosomes

21 January 2018

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A divergent transcription factor TFIIB in trypanosomes is required for RNA polymerase II-dependent spliced leader RNA transcription and cell viability

21 January 2018

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A TFIIB-like protein is indispensable for spliced leader RNA gene transcription in Trypanosoma brucei

21 January 2018

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Spliced leader RNA gene transcription in Trypanosoma brucei requires transcription factor TFIIH

21 January 2018

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Transcriptionally active TFIIH of the early-diverged eukaryote Trypanosoma brucei harbors two novel core subunits but not a cyclin-activating kinase complex

21 January 2018

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A TFIIH-associated mediator head is a basal factor of small nuclear spliced leader RNA gene transcription in early-diverged trypanosomes.

21 January 2018

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Methylated cap structures in eukaryotic RNAs: structure, synthesis and functions

21 January 2018

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Evidence for a capping enzyme with specificity for the trypanosome spliced leader RNA.

21 January 2018

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The 2'-O-ribose methyltransferase for cap 1 of spliced leader RNA and U1 small nuclear RNA in Trypanosoma brucei

21 January 2018

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The TbMTr1 spliced leader RNA cap 1 2'-O-ribose methyltransferase from Trypanosoma brucei acts with substrate specificity

21 January 2018

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The spliced leader-associated RNA is a trypanosome-specific sn(o) RNA that has the potential to guide pseudouridine formation on the SL RNA.

21 January 2018

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Trypanosoma brucei spliced leader RNA maturation by the cap 1 2'-O-ribose methyltransferase and SLA1 H/ACA snoRNA pseudouridine synthase complex

21 January 2018

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A conserved WD40 protein binds the Cajal body localization signal of scaRNP particles

21 January 2018

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Complete cap 4 formation is not required for viability in Trypanosoma brucei

21 January 2018

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2'-O-methylation of position 2 of the trypanosome spliced leader cap 4 is mediated by a 48 kDa protein related to vaccinia virus VP39.

21 January 2018

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Functional characterization of a 48 kDa Trypanosoma brucei cap 2 RNA methyltransferase

21 January 2018

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21 January 2018

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Hypermethylated cap 4 maximizes Trypanosoma brucei translation

21 January 2018

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Binding specificities and potential roles of isoforms of eukaryotic initiation factor 4E in Leishmania

21 January 2018

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Novel and essential subunits in the 300-kilodalton nuclear cap binding complex of Trypanosoma brucei

21 January 2018

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Actively transcribing RNA polymerase II concentrates on spliced leader genes in the nucleus of Trypanosoma cruzi

21 January 2018

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The promoter and transcribed regions of the Leishmania tarentolae spliced leader RNA gene array are devoid of nucleosomes

21 January 2018

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Trypanosome spliced-leader-associated RNA (SLA1) localization and implications for spliced-leader RNA biogenesis

21 January 2018

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Analysis of spliceosomal proteins in Trypanosomatids reveals novel functions in mRNA processing

21 January 2018

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Exportin 1 mediates nuclear export of the kinetoplastid spliced leader RNA.

21 January 2018

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SmD1 is required for spliced leader RNA biogenesis.

21 January 2018

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3'-End polishing of the kinetoplastid spliced leader RNA is performed by SNIP, a 3'-->5' exonuclease with a Motley assortment of small RNA substrates

21 January 2018

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SMN-assisted assembly of snRNP-specific Sm cores in trypanosomes

21 January 2018

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The SMN complex: an assembly machine for RNPs

21 January 2018

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Transcription termination and 3'-End processing of the spliced leader RNA in kinetoplastids

21 January 2018

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Elucidating the role of H/ACA-like RNAs in trans-splicing and rRNA processing via RNA interference silencing of the Trypanosoma brucei CBF5 pseudouridine synthase

21 January 2018

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Identification and functional characterization of lsm proteins in Trypanosoma brucei

21 January 2018

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Sm and Sm-like proteins assemble in two related complexes of deep evolutionary origin

21 January 2018

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A Sm-like protein complex that participates in mRNA degradation

21 January 2018

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Spliceosomal proteomics in Trypanosoma brucei reveal new RNA splicing factors

21 January 2018

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The Prp19p-associated complex in spliceosome activation

21 January 2018

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U1 small nuclear RNP from Trypanosoma brucei: a minimal U1 snRNA with unusual protein components

21 January 2018

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Temporal order of RNA-processing reactions in trypanosomes: rapid trans splicing precedes polyadenylation of newly synthesized tubulin transcripts

21 January 2018

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Control of polyadenylation and alternative splicing of transcripts from adjacent genes in a procyclin expression site: a dual role for polypyrimidine tracts in trypanosomes?

21 January 2018

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Functional characterization and protein-protein interactions of trypanosome splicing factors U2AF35, U2AF65 and SF1.

21 January 2018

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Both subunits of U2AF recognize the 3' splice site in Caenorhabditis elegans

21 January 2018

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Unique features of the Trypanosoma cruzi U2AF35 splicing factor☆

21 January 2018

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Multiple roles for polypyrimidine tract binding (PTB) proteins in trypanosome RNA metabolism

21 January 2018

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Accurate polyadenylation of procyclin mRNAs in Trypanosoma brucei is determined by pyrimidine-rich elements in the intergenic regions

21 January 2018

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Systematic study of sequence motifs for RNA trans splicing in Trypanosoma brucei

21 January 2018

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Large-scale comparative analysis of splicing signals and their corresponding splicing factors in eukaryotes

21 January 2018

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Spliced-leader RNA silencing: a novel stress-induced mechanism in Trypanosoma brucei

21 January 2018

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Persistent ER stress induces the spliced leader RNA silencing pathway (SLS), leading to programmed cell death in Trypanosoma brucei.

21 January 2018

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An endoplasmic reticulum stress-specific caspase cascade in apoptosis. Cytochrome c-independent activation of caspase-9 by caspase-12

21 January 2018

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Coupling endoplasmic reticulum stress to the cell death program

21 January 2018

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Divergent effects of PERK and IRE1 signaling on cell viability

21 January 2018

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Cotranscriptional Cap 4 Formation on theTrypanosoma bruceiSpliced Leader RNA

21 January 2018

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New components of the spliced leader RNP required for nematode trans-splicing

21 January 2018

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21 January 2018

Identifiers

DOI

10.2217/FMB.11.20

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31 July 2017

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