Transcriptional responses to DNA damage (Q34205013)

31 July 2017

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title

Transcriptional responses to DNA damage. (English)

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31 July 2017

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Volkert MR

1

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31 July 2017

Landini P

series ordinal

2

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31 July 2017

publication date

1 April 2001

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Current Opinion in Microbiology

31 July 2017

published in

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31 July 2017

volume

4

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31 July 2017

issue

2

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31 July 2017

page(s)

178-185

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Comparative mutagenesis of O6-methylguanine and O4-methylthymine in Escherichia coli.

31 July 2017

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7 January 2021

8-oxoguanine (8-hydroxyguanine) DNA glycosylase and its substrate specificity

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7 January 2021

Methylation-induced blocks to in vitro DNA replication

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7 January 2021

Repair of oxidative damage to DNA: enzymology and biology

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7 January 2021

The dinB gene encodes a novel E. coli DNA polymerase, DNA pol IV, involved in mutagenesis

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7 January 2021

UmuD'(2)C is an error-prone DNA polymerase, Escherichia coli pol V.

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7 January 2021

A novel repair enzyme: UVRABC excision nuclease of Escherichia coli cuts a DNA strand on both sides of the damaged region

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7 January 2021

Repair of N-methyl-N'-nitro-N-nitrosoguanidine-induced DNA damage by ABC excinuclease.

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7 January 2021

Bimodal pattern of killing of DNA-repair-defective or anoxically grown Escherichia coli by hydrogen peroxide

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7 January 2021

Efficient repair of hydrogen peroxide-induced DNA damage by Escherichia coli requires SOS induction of RecA and RuvA proteins

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7 January 2021

Mutagenesis and stress responses induced in Escherichia coli by hydrogen peroxide

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7 January 2021

The recA+ gene product is more important than catalase and superoxide dismutase in protecting Escherichia coli against hydrogen peroxide toxicity

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https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Nature of the SOS-inducing signal in Escherichia coli. The involvement of DNA replication.

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7 January 2021

SOS induction in Escherichia coli by infection with mutant filamentous phage that are defective in initiation of complementary-strand DNA synthesis

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7 January 2021

Mutations at Pro67 in the RecA protein P-loop motif differentially modify coprotease function and separate coprotease from recombination activities

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7 January 2021

Model for regulation of Escherichia coli DNA repair functions

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7 January 2021

The recombination hot spot chi activates RecBCD recombination by converting Escherichia coli to a recD mutant phenocopy

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https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Double-strand end repair via the RecBC pathway in Escherichia coli primes DNA replication

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7 January 2021

Discontinuities in the DNA synthesized in an Excision-defective strain of Escherichia coli following ultraviolet irradiation

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7 January 2021

Autodigestion of lexA and phage lambda repressors

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7 January 2021

Analysis of Escherichia coli RecA interactions with LexA, lambda CI, and UmuD by site-directed mutagenesis of recA.

1 reference

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7 January 2021

Identification of additional genes belonging to the LexA regulon in Escherichia coli

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7 January 2021

Proteolytic cleavage of bacteriophage lambda repressor in induction

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https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

A new pathway for DNA repair in Escherichia coli

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https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Adaptive response of Escherichia coli to alkylation damage

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Regulation and expression of the adaptive response to alkylating agents

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

1 reference

7 January 2021

Initiation of base excision repair: glycosylase mechanisms and structures

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https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Expression of DNA damage-inducible genes of Escherichia coli upon treatment with methylating, ethylating and propylating agents

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Structure and transcriptional regulation of the Escherichia coli adaptive response gene aidB.

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

The leucine-responsive regulatory protein (Lrp) acts as a specific repressor for sigma s-dependent transcription of the Escherichia coli aidB gene

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Generation of an endogenous DNA-methylating agent by nitrosation in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Induction of resistance to alkylating agents in E. coli: the ada+ gene product serves both as a regulatory protein and as an enzyme for repair of mutagenic damage

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Regulatory mechanisms for induction of synthesis of repair enzymes in response to alkylating agents: ada protein acts as a transcriptional regulator

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Active site and complete sequence of the suicidal methyltransferase that counters alkylation mutagenesis

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

E. coli Ada regulatory protein repairs the SP diastereoisomer of alkylated DNA.

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Cloning of the E. coli O6-methylguanine and methylphosphotriester methyltransferase gene using a functional DNA repair assay

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Methyl phosphotriesters in alkylated DNA are repaired by the Ada regulatory protein of E. coli

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Regulatory responses of the adaptive response to alkylation damage: a simple regulon with complex regulatory features

1 reference

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7 January 2021

A third recognition element in bacterial promoters: DNA binding by the alpha subunit of RNA polymerase

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7 January 2021

UPs and downs in bacterial transcription initiation: the role of the alpha subunit of RNA polymerase in promoter recognition

1 reference

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7 January 2021

The RNA polymerase alpha subunit carboxyl-terminal domain is required for both basal and activated transcription from the alkA promoter.

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Ada protein-RNA polymerase sigma subunit interaction and alpha subunit-promoter DNA interaction are necessary at different steps in transcription initiation at the Escherichia coli Ada and aidB promoters

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Expression of the Escherichia coli ada regulon in stationary phase: evidence for rpoS-dependent negative regulation of alkA transcription.

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

A region of the Ada DNA-repair protein required for the activation of ada transcription is not necessary for activation of alkA

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Alteration of the carboxyl-terminal domain of Ada protein influences its inducibility, specificity, and strength as a transcriptional activator

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Positive and negative regulation of transcription by a cleavage product of Ada protein

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

The Escherichia coli Ada protein can interact with two distinct determinants in the sigma70 subunit of RNA polymerase according to promoter architecture: identification of the target of Ada activation at the alkA promoter

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Formation, Prevention, and Repair of DNA Damage by Iron/Hydrogen Peroxide

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Removal by human apurinic/apyrimidinic endonuclease 1 (Ape 1) and Escherichia coli exonuclease III of 3'-phosphoglycolates from DNA treated with neocarzinostatin, calicheamicin, and gamma-radiation.

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

soxR, a locus governing a superoxide response regulon in Escherichia coli K-12

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Role for the oxyS gene in regulation of intracellular hydrogen peroxide in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Two-stage induction of the soxRS (superoxide response) regulon of Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Binuclear [2Fe-2S] Clusters in the Escherichia coli SoxR Protein and Role of the Metal Centers in Transcription

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Spacing of promoter elements regulates the basal expression of the soxS gene and converts SoxR from a transcriptional activator into a repressor

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Redox signal transduction: mutations shifting [2Fe-2S] centers of the SoxR sensor-regulator to the oxidized form

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Two divergently transcribed genes, soxR and soxS, control a superoxide response regulon of Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Endonuclease IV of Escherichia coli is induced by paraquat

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

SoxR, a [2Fe-2S] transcription factor, is active only in its oxidized form

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Regulation of the soxRS oxidative stress regulon. Reversible oxidation of the Fe-S centers of SoxR in vivo

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Molecular characterization of the soxRS genes of Escherichia coli: two genes control a superoxide stress regulon

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

The redox-regulated SoxR protein acts from a single DNA site as a repressor and an allosteric activator

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Thiol-mediated disassembly and reassembly of [2Fe-2S] clusters in the redox-regulated transcription factor SoxR.

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

The redox state of the [2Fe-2S] clusters in SoxR protein regulates its activity as a transcription factor.

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Activation of the OxyR transcription factor by reversible disulfide bond formation

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Regulation of the OxyR transcription factor by hydrogen peroxide and the cellular thiol-disulfide status

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Regulation of bacterial gene expression in response to oxidative stress

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Protection of DNA during oxidative stress by the nonspecific DNA-binding protein Dps

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

The dps promoter is activated by OxyR during growth and by IHF and σs in stationary phase

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

A small, stable RNA induced by oxidative stress: role as a pleiotropic regulator and antimutator

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

fhlA repression by OxyS RNA: kissing complex formation at two sites results in a stable antisense-target RNA complex

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Mutational analysis of the redox-sensitive transcriptional regulator OxyR: regions important for oxidation and transcriptional activation

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Mapping of the OxyR protein contact site in the C-terminal region of RNA polymerase alpha subunit

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

Protein-protein communication within the transcription apparatus

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

A model for a umuDC-dependent prokaryotic DNA damage checkpoint

1 reference

https://api.crossref.org/works/10.1016%2FS1369-5274%2800%2900186-7

7 January 2021

10.1016/S1369-5274(00)00186-7

Identifiers

DOI

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31 July 2017

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