SigReannot-mart: a query environment for expression microarray probe re-annotations (Q34217506)

31 July 2017

title

SigReannot-mart: a query environment for expression microarray probe re-annotations (English)

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31 July 2017

4

Christophe Klopp

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31 July 2017

François Moreews

1

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31 July 2017

Gaelle Rauffet

series ordinal

2

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31 July 2017

Patrice Dehais

series ordinal

3

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31 July 2017

publication date

18 September 2011

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31 July 2017

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31 July 2017

volume

2011

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31 July 2017

page(s)

bar025

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Design, validation and annotation of transcriptome-wide oligonucleotide probes for the oligochaete annelid Eisenia fetida

31 July 2017

cites work

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3263592

Integrating multiple genome annotation databases improves the interpretation of microarray gene expression data

5 July 2018

1 reference

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Using transcriptome profiling to characterize QTL regions on chicken chromosome 5.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3263592

OligoRAP - an Oligo Re-Annotation Pipeline to improve annotation and estimate target specificity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3263592

sigReannot: an oligo-set re-annotation pipeline based on similarities with the Ensembl transcripts and Unigene clusters

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3263592

IMAD: flexible annotation of microarray sequences

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3263592

Comparison of three microarray probe annotation pipelines: differences in strategies and their effect on downstream analysis.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3263592

BioMart Central Portal--unified access to biological data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3263592

An open-access long oligonucleotide microarray resource for analysis of the human and mouse transcriptomes.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3263592

DAVID: Database for Annotation, Visualization, and Integrated Discovery

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3263592

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3263592

5 July 2018

Identifiers

DOI

10.1093/DATABASE/BAR025

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31 July 2017

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31 July 2017

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