Environmental and ecological factors that shape the gut bacterial communities of fish: a meta-analysis (Q34225669)

31 July 2017

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Environmental and ecological factors that shape the gut bacterial communities of fish: a meta-analysis (English)

1 reference

31 July 2017

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0 references

Karen E Sullam

1

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Rob Knight

object named as

Rob Knight

6

0 references

Catherine A. Lozupone

3

object named as

Catherine A Lozupone

1 reference

31 July 2017

7

Susan S Kilham

1 reference

31 July 2017

Steven D Essinger

2

1 reference

31 July 2017

Michael P O'Connor

4

1 reference

31 July 2017

Gail L Rosen

5

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31 July 2017

Jacob A Russell

8

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31 July 2017

publication date

4 April 2012

1 reference

31 July 2017

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31 July 2017

volume

21

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31 July 2017

issue

13

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31 July 2017

page(s)

3363-3378

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maintained by WikiProject

31 July 2017

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Impact of scoring error and reproducibility RAPD data on RAPD based estimates of genetic distance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Comparison of midgut bacterial diversity in tropical caterpillars (Lepidoptera: Saturniidae) fed on different diets

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Defining seasonal marine microbial community dynamics

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Diet drives convergence in gut microbiome functions across mammalian phylogeny and within humans

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Marine bacterial, archaeal and protistan association networks reveal ecological linkages.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Induction of colonic regulatory T cells by indigenous Clostridium species

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Characterization of the fecal microbiome from non-human wild primates reveals species specific microbial communities

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Epibacterial community patterns on marine macroalgae are host-specific but temporally variable

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

The immune system and the gut microbiota: friends or foes?

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Soil bacterial diversity in the Arctic is not fundamentally different from that found in other biomes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Molecular identification of intestinal microflora in Takifugu niphobles

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Abundance, diversity, and activity of microbial assemblages associated with coral reef fish guts and feces

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Phylogenetic characterization and in situ detection of bacterial communities associated with seahorses (Hippocampus guttulatus) in captivity.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

The seasonal structure of microbial communities in the Western English Channel

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Characterization of the intestinal microbiota of two Antarctic notothenioid fish species

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Infernal 1.0: inference of RNA alignments

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Genomics and evolution of heritable bacterial symbionts

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Worlds within worlds: evolution of the vertebrate gut microbiota

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Evolution of mammals and their gut microbes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Dominance of Mycoplasma in the guts of the Long-Jawed Mudsucker, Gillichthys mirabilis, from five California salt marshes.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Global patterns in bacterial diversity

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Microbial diversity of intestinal contents and mucus in rainbow trout (Oncorhynchus mykiss).

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Reciprocal gut microbiota transplants from zebrafish and mice to germ-free recipients reveal host habitat selection

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

UniFrac--an online tool for comparing microbial community diversity in a phylogenetic context

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Communication in bacteria: an ecological and evolutionary perspective

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

The diversity and biogeography of soil bacterial communities

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Gnotobiotic zebrafish reveal evolutionarily conserved responses to the gut microbiota

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Nutritional interactions in insect-microbial symbioses: aphids and their symbiotic bacteria Buchnera

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

ARB: a software environment for sequence data

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Surface polysaccharide involvement in establishing the rhizobium-legume symbiosis.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

28 July 2018

The largest bacterium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

Symbiont recognition and subsequent morphogenesis as early events in an animal-bacterial mutualism

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3882143

The gut microbiota as an environmental factor that regulates fat storage

28 July 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2012.05552.X

Molecular phylogeny of the live-bearing fish genus Poecilia (Cyprinodontiformes: Poeciliidae).

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2012.05552.X

The role of pH in determining the species composition of the human colonic microbiota

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2012.05552.X

Phylogenetic analysis and in situ identification of the intestinal microbial community of rainbow trout (Oncorhynchus mykiss, Walbaum).

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2012.05552.X

UniFrac: a new phylogenetic method for comparing microbial communities

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2012.05552.X

Evidence for a core gut microbiota in the zebrafish.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2012.05552.X

Taxonomic Note: A Place for DNA-DNA Reassociation and 16S rRNA Sequence Analysis in the Present Species Definition in Bacteriology

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2012.05552.X

An obesity-associated gut microbiome with increased capacity for energy harvest

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2012.05552.X

Extending genomics to natural communities and ecosystems.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2012.05552.X

Intestinal microbiota variation in Senegalese sole (Solea senegalensis) under different feeding regimes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-294X.2012.05552.X

Identification of intestinal bacteria from Japanese flounder (Paralichthys olivaceus) and their ability to digest chitin

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22486918

12 December 2020

inferred from PubMed ID database lookup

Bacterial Interactions in Early Life Stages of Marine Cold Water Fish

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22486918

12 December 2020

inferred from PubMed ID database lookup

Host-microbiota interactions within the fish intestinal ecosystem

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22486918

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1111/J.1365-294X.2012.05552.X

1 reference

release_gabah4hb65fslm5yg7djk26jke

31 July 2017

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/gabah4hb65fslm5yg7djk26jke

24 November 2022

mapped directly with Wikidata item

PMC publication ID

3882143

1 reference

31 July 2017

1 reference