Sequencing of random Euplotes crassus macronuclear genes supports a high frequency of +1 translational frameshifting. (Q34232921)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16339727%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

title

Sequencing of random Euplotes crassus macronuclear genes supports a high frequency of +1 translational frameshifting (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16339727%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

Euplotes crassus

1 reference

inferred from title

author

Lawrence A. Klobutcher

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16339727%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

Lawrence A. Klobutcher

series ordinal

1

object named as

Lawrence A Klobutcher

1 reference

31 July 2017

1 December 2005

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16339727%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16339727%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

volume

4

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10 January 2020

issue

12

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10 January 2020

page(s)

2098-2105

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16339727%20AND%20SRC:MED&resulttype=core&format=json

Distinct paths to stop codon reassignment by the variant-code organisms Tetrahymena and Euplotes

10 January 2020

cites work

1 reference

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Evolution of programmed ribosomal frameshifting in the TERT genes of Euplotes

6 July 2018

1 reference

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Homo-oligomerization of ALS2 through its unique carboxyl-terminal regions is essential for the ALS2-associated Rab5 guanine nucleotide exchange activity and its regulatory function on endosome trafficking

6 July 2018

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BLAST: at the core of a powerful and diverse set of sequence analysis tools

6 July 2018

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MSAP, the meichroacidin homolog of carp (Cyprinus carpio), differs from the rodent counterpart in germline expression and involves flagellar differentiation

6 July 2018

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WebLogo: A Sequence Logo Generator

6 July 2018

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6 July 2018

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Developmentally programmed gene elimination in Euplotes crassus facilitates a switch in the telomerase catalytic subunit

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317503

The Euplotes La motif protein p43 has properties of a telomerase-specific subunit

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317503

Stop codon selection in eukaryotic translation termination: comparison of the discriminating potential between human and ciliate eRF1s

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317503

Selection on the genes of Euplotes crassus Tec1 and Tec2 transposons: evolutionary appearance of a programmed frameshift in a Tec2 gene encoding a tyrosine family site-specific recombinase

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317503

Shifty ciliates: frequent programmed translational frameshifting in euplotids

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317503

Oligomerization of the telomerase reverse transcriptase from Euplotes crassus

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317503

Recoding: translational bifurcations in gene expression.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317503

Stop codon recognition in ciliates: Euplotes release factor does not respond to reassigned UGA codon

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317503

Euplotes telomerase contains an La motif protein produced by apparent translational frameshifting

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317503

Junctophilins: a novel family of junctional membrane complex proteins

6 July 2018

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Translational frameshifting: implications for the mechanism of translational frame maintenance

6 July 2018

1 reference

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Combining evidence using p-values: application to sequence homology searches

6 July 2018

1 reference

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Isolation and characterization of a novel actin filament-binding protein from Saccharomyces cerevisiae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317503

Programmed translational frameshifting in a gene required for yeast telomere replication

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317503

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317503

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317503

DNA rearrangements in Euplotes crassus coincide with discrete periods of DNA replication during the polytene chromosome stage of macronuclear development

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317503

Structures of the Euplotes crassus Tec1 and Tec2 elements: identification of putative transposase coding regions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317503

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317503

Macronuclear gene-sized molecules of hypotrichs

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317503

Gene-sized DNA molecules of the macronuclei in three species of hypotrichs: size distributions and absence of nicks. DNA of ciliated protozoa. VIII.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317503

All gene-sized DNA molecules in four species of hypotrichs have the same terminal sequence and an unusual 3' terminus

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317503

Large scale synchronous mating and the study of macronuclear development in Euplotes crassus

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317503

Differential use of termination codons in ciliated protozoa

6 July 2018

1 reference

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Sequence logos: a new way to display consensus sequences

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317503

Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317503

UGA is translated as cysteine in pheromone 3 of Euplotes octocarinatus

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317503

Translational accuracy and the fitness of bacteria

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317503

Programmed translational frameshifting is likely required for expressions of genes encoding putative nuclear protein kinases of the ciliate Euplotes octocarinatus

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317503

Analysis of micronuclear, macronuclear and cDNA sequences encoding the regulatory subunit of cAMP-dependent protein kinase of Euplotes octocarinatus: evidence for a ribosomal frameshift.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1317503

Ribosome structure: revisiting the connection between translational accuracy and unconventional decoding

28 October 2018

1 reference

12 December 2020

The telomerase-associated protein p43 is involved in anchoring telomerase in the nucleus

1 reference

12 December 2020

DNA fragment purification: removal of agarose 10 minutes after electrophoresis

1 reference

12 December 2020

Programmed translational frameshifting

1 reference

12 December 2020

10.1128/EC.4.12.2098-2105.2005

Identifiers

DOI

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16339727%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16339727%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

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