Argot2: a large scale function prediction tool relying on semantic similarity of weighted Gene Ontology terms. (Q34247968)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22536960%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

title

Argot2: a large scale function prediction tool relying on semantic similarity of weighted Gene Ontology terms (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22536960%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

0 references

1 reference

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22536960%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

Stefano Toppo

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22536960%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

Enrico Lavezzo

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22536960%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

Riccardo Velasco

8

1 reference

ORCID Public Data File 2021

Paolo Fontana

9

object named as

Paolo Fontana

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22536960%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

author name string

Alessandro Pescarolo

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22536960%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

Barbara Di Camillo

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22536960%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

Elisa Cilia

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22536960%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

Andrea Facchinetti

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22536960%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

publication date

28 March 2012

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22536960%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22536960%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

volume

13 Suppl 4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22536960%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

page(s)

S14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22536960%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 2.0 Generic

30 January 2020

copyright license

start time

28 March 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

exact match

https://scigraph.springernature.com/pub.10.1186/1471-2105-13-s4-s14

0 references

cites work

Disjunctive shared information between ontology concepts: application to Gene Ontology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3314586

The genome of the domesticated apple (Malus × domestica Borkh.)

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3314586

From complete genome sequence to 'complete' understanding?

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3314586

The Pfam protein families database

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3314586

A statistical model of protein sequence similarity and function similarity reveals overly-specific function predictions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3314586

Rapid annotation of anonymous sequences from genome projects using semantic similarities and a weighting scheme in gene ontology

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3314586

The GOA database in 2009--an integrated Gene Ontology Annotation resource

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3314586

Blast2GO: A comprehensive suite for functional analysis in plant genomics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3314586

High-throughput functional annotation and data mining with the Blast2GO suite

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3314586

A high quality draft consensus sequence of the genome of a heterozygous grapevine variety

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3314586

Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3314586

The Universal Protein Resource (UniProt)

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3314586

GOtcha: a new method for prediction of protein function assessed by the annotation of seven genomes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3314586

Investigating semantic similarity measures across the Gene Ontology: the relationship between sequence and annotation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3314586

Enzyme function less conserved than anticipated.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3314586

Evolution of function in protein superfamilies, from a structural perspective.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3314586

Gene ontology: tool for the unification of biology

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3314586

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3314586

How Well is Enzyme Function Conserved as a Function of Pairwise Sequence Identity?

6 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1471-2105-13-S4-S14

Practical limits of function prediction

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22536960

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2105-13-S4-S14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22536960%20AND%20SRC:MED&resulttype=core&format=json

journals/bmcbi/FaldaTPLCFCVF12

30 January 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22536960%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

PubMed publication ID

22536960

1 reference