Fast and sensitive mapping of bisulfite-treated sequencing data (Q34267231)

1 August 2017

Fast and sensitive mapping of bisulfite-treated sequencing data (English)

1 reference

1 August 2017

2

1 reference

1 August 2017

1

Christian Otto

1 reference

1 August 2017

Steve Hoffmann

3

1 reference

PubMed ID

22581174

1 August 2017

language of work or name

English

0 references

publication date

10 May 2012

1 reference

1 August 2017

1 reference

1 August 2017

28

1 reference

1 August 2017

13

1 reference

1 August 2017

1698-1704

1 reference

Replacing suffix trees with enhanced suffix arrays

1 August 2017

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

Patterns of damage in genomic DNA sequences from a Neandertal

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

Linking DNA methylation and histone modification: patterns and paradigms

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

BS Seeker: precise mapping for bisulfite sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

The Draft Genome of Ciona intestinalis: Insights into Chordate and Vertebrate Origins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

Cancer epigenomics: DNA methylomes and histone-modification maps

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

A genomic sequencing protocol that yields a positive display of 5-methylcytosine residues in individual DNA strands

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

Extensive demethylation of repetitive elements during seed development underlies gene imprinting

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

Increased methylation variation in epigenetic domains across cancer types

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

Fast mapping of short sequences with mismatches, insertions and deletions using index structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

The behaviour of 5-hydroxymethylcytosine in bisulfite sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

Finding the fifth base: genome-wide sequencing of cytosine methylation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

Human DNA methylomes at base resolution show widespread epigenomic differences

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

Mapping short DNA sequencing reads and calling variants using mapping quality scores

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

The Sequence Alignment/Map format and SAMtools

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

The DNA methylome of human peripheral blood mononuclear cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

The honey bee epigenomes: differential methylation of brain DNA in queens and workers

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

Reduced representation bisulfite sequencing for comparative high-resolution DNA methylation analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

Natural genetic variation caused by small insertions and deletions in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

A fast bit-vector algorithm for approximate string matching based on dynamic programming

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

Computational challenges in the analysis of ancient DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

The amphioxus genome and the evolution of the chordate karyotype

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

Stability and flexibility of epigenetic gene regulation in mammalian development

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

MBD-isolated Genome Sequencing provides a high-throughput and comprehensive survey of DNA methylation in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

Updates to the RMAP short-read mapping software

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

Genomic patterns of DNA methylation: targets and function of an epigenetic mark

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

Single base-resolution methylome of the silkworm reveals a sparse epigenomic map.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

BSMAP: whole genome bisulfite sequence MAPping program

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS254

10.1093/BIOINFORMATICS/BTS254

21 January 2018

Identifiers

DOI

1 reference

journals/bioinformatics/OttoSH12

1 August 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

PubMed ID

22581174