Software support for SBGN maps: SBGN-ML and LibSBGN. (Q34267239)

1 August 2017

Software support for SBGN maps: SBGN-ML and LibSBGN. (English)

1 reference

1 August 2017

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16

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1 August 2017

5

Frank T Bergmann

1 reference

1 August 2017

Martijn P van Iersel

1

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Sarah E. Boyd

Sarah E Boyd

4

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Akira Funahashi

Akira Funahashi

11

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Anatoly A. Sorokin

Anatoly Sorokin

8

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Emek Demir

7

Emek Demir

1 reference

1 August 2017

10

Yukiko Matsuoka

1 reference

1 August 2017

Alice C Villéger

2

1 reference

1 August 2017

Tobias Czauderna

3

1 reference

1 August 2017

Augustin Luna

6

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1 August 2017

Ugur Dogrusoz

9

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1 August 2017

Mirit I Aladjem

12

1 reference

1 August 2017

Huaiyu Mi

13

1 reference

1 August 2017

Stuart L Moodie

14

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1 August 2017

Hiroaki Kitano

15

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1 August 2017

Falk Schreiber

17

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1 August 2017

language of work or name

English

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publication date

10 May 2012

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1 August 2017

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1 August 2017

28

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1 August 2017

15

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1 August 2017

2016-2021

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Creative Commons Attribution-NonCommercial 3.0 Unported

1 August 2017

start time

2 October 2016

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April 2023 Public Data File from Crossref

copyright status

copyrighted

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cites work

PathVisio-Validator: a rule-based validation plugin for graphical pathway notations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3400951

JSBML: a flexible Java library for working with SBML.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3400951

A formal MIM specification and tools for the common exchange of MIM diagrams: an XML-Based format, an API, and a validation method

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3400951

The BioPAX community standard for pathway data sharing

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3400951

Editing, validating and translating of SBGN maps

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3400951

VISIBIOweb: visualization and layout services for BioPAX pathway models

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3400951

Arcadia: a visualization tool for metabolic pathways

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3400951

Presenting and exploring biological pathways with PathVisio

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3400951

LibSBML: an API library for SBML.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3400951

A model diagram layout extension for SBML

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3400951

Molecular interaction maps of bioregulatory networks: a general rubric for systems biology

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3400951

The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3400951

Supporting the SBML layout extension.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3400951

Using process diagrams for the graphical representation of biological networks

28 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22581176

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The Systems Biology Graphical Notation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22581176

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Synthetic protein scaffolds provide modular control over metabolic flux.

1 reference

12 August 2022

https://opencitations.net/index/coci/api/v1/references/10.1093/BIOINFORMATICS/BTS270

Identifiers

DOI

10.1093/BIOINFORMATICS/BTS270

1 reference

journals/bioinformatics/IerselVCBBLDSDMFAMMKNS12

1 August 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

1 August 2017

1 reference